RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 P4HBP07237 508 aaKnown RBP15.88■□□□□ 0.13
SNX6-210ENST00000557341 PDE12Q6L8Q7 609 aaKnown RBP15.88■□□□□ 0.13
SNX6-210ENST00000557341 RBM23Q86U06 439 aaKnown RBP15.88■□□□□ 0.13
SNX6-210ENST00000557341 MICAL1Q8TDZ2 1067 aa15.88■□□□□ 0.13
SNX6-210ENST00000557341 SLC7A3Q8WY07 619 aa15.88■□□□□ 0.13
SNX6-210ENST00000557341 MSLNLQ96KJ4 702 aa15.88■□□□□ 0.13
SNX6-210ENST00000557341 NLRP4Q96MN2 994 aa15.88■□□□□ 0.13
SNX6-210ENST00000557341 FDXACB1Q9BRP7 624 aaPredicted RBP15.88■□□□□ 0.13
SNX6-210ENST00000557341 LRFN3Q9BTN0 628 aa15.88■□□□□ 0.13
SNX6-210ENST00000557341 MRPL9Q9BYD2 267 aaKnown RBP15.88■□□□□ 0.13
SNX6-210ENST00000557341 INO80BQ9C086 356 aaPredicted RBP15.88■□□□□ 0.13
SNX6-210ENST00000557341 CYP26B1Q9NR63 512 aa15.88■□□□□ 0.13
SNX6-210ENST00000557341 SUCLA2Q9P2R7 463 aaPredicted RBP15.88■□□□□ 0.13
SNX6-210ENST00000557341 RAPGEFL1Q9UHV5 662 aa15.88■□□□□ 0.13
SNX6-210ENST00000557341 LZTS1Q9Y250 596 aa15.88■□□□□ 0.13
SNX6-210ENST00000557341 PPME1Q9Y570 386 aa15.88■□□□□ 0.13
SNX6-210ENST00000557341 PCDHGC5Q9Y5F6 944 aa15.88■□□□□ 0.13
SNX6-210ENST00000557341 GPR37L1O60883 481 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 CSDE1O75534 798 aaKnown RBP15.87■□□□□ 0.13
SNX6-210ENST00000557341 LARGE1O95461 756 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 GLP2RO95838 553 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 ALADP13716 330 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 POLGP54098 1239 aaPredicted RBP15.87■□□□□ 0.13
SNX6-210ENST00000557341 PLCB3Q01970 1234 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 NR5A1Q13285 461 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 ME3Q16798 604 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 CLLU1OSQ5K130 101 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 NCAPH2Q6IBW4 605 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 KCNT2Q6UVM3 1135 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 LRRC55Q6ZSA7 311 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 ZNF598Q86UK7 904 aaKnown RBP15.87■□□□□ 0.13
SNX6-210ENST00000557341 EXOC8Q8IYI6 725 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 SLFN12Q8IYM2 578 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 NECAB1Q8N987 351 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 RSPH1Q8WYR4 309 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 MRPS27Q92552 414 aaKnown RBP15.87■□□□□ 0.13
SNX6-210ENST00000557341 HAS1Q92839 578 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 ZNF558Q96NG5 402 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 CDCA3Q99618 268 aaPredicted RBP15.87■□□□□ 0.13
SNX6-210ENST00000557341 LXNQ9BS40 222 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 TLE6Q9H808 572 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 C11orf16Q9NQ32 467 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 CHST12Q9NRB3 414 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 PIN4Q9Y237 131 aaKnown RBP15.87■□□□□ 0.13
SNX6-210ENST00000557341 HCN4Q9Y3Q4 1203 aa15.87■□□□□ 0.13
SNX6-210ENST00000557341 FAM86C2PA6NEL3 165 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 FAM205CA6NFA0 338 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 C19orf67A6NJJ6 358 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 BAG4O95429 457 aaKnown RBP15.86■□□□□ 0.13
SNX6-210ENST00000557341 EYA4O95677 639 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 FDPSP14324 419 aaKnown RBP15.86■□□□□ 0.13
SNX6-210ENST00000557341 ATF7P17544 494 aaPredicted RBP15.86■□□□□ 0.13
SNX6-210ENST00000557341 RFC5P40937 340 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 ERVFC1P60507 584 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 COASYQ13057 564 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 EARS2Q5JPH6 523 aaKnown RBP15.86■□□□□ 0.13
SNX6-210ENST00000557341 TWF2Q6IBS0 349 aaKnown RBP15.86■□□□□ 0.13
SNX6-210ENST00000557341 C4orf19Q8IY42 314 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 SMRP1Q8NCR6 262 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 NSUN7Q8NE18 718 aaKnown RBP15.86■□□□□ 0.13
SNX6-210ENST00000557341 HELQQ8TDG4 1101 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 CEP170P1Q96L14 293 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 TRAIPQ9BWF2 469 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 ENTPD7Q9NQZ7 604 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 CLEC1BQ9P126 229 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 WRAP73Q9P2S5 460 aaPredicted RBP15.86■□□□□ 0.13
SNX6-210ENST00000557341 PUF60Q9UHX1 559 aaKnown RBP15.86■□□□□ 0.13
SNX6-210ENST00000557341 BARX2Q9UMQ3 279 aaPredicted RBP15.86■□□□□ 0.13
SNX6-210ENST00000557341 COL4A3BPQ9Y5P4 624 aa15.86■□□□□ 0.13
SNX6-210ENST00000557341 DENND4AQ7Z401 1863 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 FSCN2O14926 492 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 DCXO43602 365 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 GAS2O43903 313 aaKnown RBP15.85■□□□□ 0.13
SNX6-210ENST00000557341 SRGAP2BP0DMP2 458 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 SKIP12755 728 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 YWHABP31946 246 aaKnown RBP15.85■□□□□ 0.13
SNX6-210ENST00000557341 PBX3P40426 434 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 PHKA2P46019 1235 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 NEK4P51957 841 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 NPEPPSP55786 919 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 KRT17Q04695 432 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 SPIRE1Q08AE8 756 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 TRIM29Q14134 588 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 EPHA7Q15375 998 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 DUSP6Q16828 381 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 PLPP4Q5VZY2 271 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 CATSPER4Q7RTX7 472 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 KSR1Q8IVT5 923 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 PSPC1Q8WXF1 523 aaKnown RBP15.85■□□□□ 0.13
SNX6-210ENST00000557341 TNFRSF25Q93038 417 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 TCF25Q9BQ70 676 aa15.85■□□□□ 0.13
SNX6-210ENST00000557341 DHX33Q9H6R0 707 aaKnown RBP15.85■□□□□ 0.13
SNX6-210ENST00000557341 PER2O15055 1255 aa15.84■□□□□ 0.13
SNX6-210ENST00000557341 RAB27AP51159 221 aa15.84■□□□□ 0.13
SNX6-210ENST00000557341 OTUD6AQ7L8S5 288 aa15.84■□□□□ 0.13
SNX6-210ENST00000557341 TCP11Q8WWU5 503 aa15.84■□□□□ 0.13
SNX6-210ENST00000557341 DYDC2Q96IM9 177 aa15.84■□□□□ 0.13
SNX6-210ENST00000557341 ZSWIM4Q9H7M6 989 aa15.84■□□□□ 0.13
SNX6-210ENST00000557341 IFT122Q9HBG6 1241 aa15.84■□□□□ 0.13
SNX6-210ENST00000557341 BMP2KQ9NSY1 1161 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms