RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 NIM1KQ8IY84 436 aa5.34□□□□□ -1.55
CHD8-212ENST00000557329 FEZF2Q8TBJ5 459 aa5.34□□□□□ -1.55
CHD8-212ENST00000557329 AJUBAQ96IF1 538 aa5.34□□□□□ -1.55
CHD8-212ENST00000557329 CLUHP3Q96NS8 147 aa5.34□□□□□ -1.55
CHD8-212ENST00000557329 PCIF1Q9H4Z3 704 aa5.34□□□□□ -1.55
CHD8-212ENST00000557329 STK26Q9P289 416 aa5.34□□□□□ -1.55
CHD8-212ENST00000557329 B4GALT6Q9UBX8 382 aa5.34□□□□□ -1.55
CHD8-212ENST00000557329 ADAM29Q9UKF5 820 aa5.34□□□□□ -1.55
CHD8-212ENST00000557329 UTRNP46939 3433 aa5.34□□□□□ -1.55
CHD8-212ENST00000557329 ZFYVE9O95405 1425 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 DCCP43146 1447 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 METP08581 1390 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 LRPPRCP42704 1394 aaKnown RBP5.33□□□□□ -1.56
CHD8-212ENST00000557329 FAM83GA6ND36 823 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 M0R2C6 588 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 SCDO00767 359 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 DNAJC8O75937 253 aaPredicted RBP5.33□□□□□ -1.56
CHD8-212ENST00000557329 HSD3B2P26439 372 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 POLD1P28340 1107 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 KRTAP10-2P60368 255 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 FAM50AQ14320 339 aaKnown RBP5.33□□□□□ -1.56
CHD8-212ENST00000557329 SART3Q15020 963 aaKnown RBP5.33□□□□□ -1.56
CHD8-212ENST00000557329 STILQ15468 1287 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 PLEKHG4Q58EX7 1191 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 ZMAT1Q5H9K5 638 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 KIAA0907Q7Z7F0 614 aaPredicted RBP5.33□□□□□ -1.56
CHD8-212ENST00000557329 STK32CQ86UX6 486 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 RBM12BQ8IXT5 1001 aaKnown RBP5.33□□□□□ -1.56
CHD8-212ENST00000557329 HIPK4Q8NE63 616 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 MFSD3Q96ES6 412 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 ZSWIM3Q96MP5 696 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 CAMKK2Q96RR4 588 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 CARD11Q9BXL7 1154 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 IFT57Q9NWB7 429 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 TNPO3Q9Y5L0 923 aaKnown RBP5.33□□□□□ -1.56
CHD8-212ENST00000557329 GCC2Q8IWJ2 1684 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 CAMTA1Q9Y6Y1 1673 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 GLI3P10071 1580 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 ARHGEF5Q12774 1597 aa5.33□□□□□ -1.56
CHD8-212ENST00000557329 RPRD2Q5VT52 1461 aaKnown RBP5.32□□□□□ -1.56
CHD8-212ENST00000557329 ERBINQ96RT1 1412 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 A0A1B0GTL3 188 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 CBX4O00257 560 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 PPP1R12AO14974 1030 aaPredicted RBP5.32□□□□□ -1.56
CHD8-212ENST00000557329 KLHL18O94889 574 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 PLATP00750 562 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 CELA3BP08861 270 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 JMJD7P0C870 316 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 ECE1P42892 770 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 MLLT6P55198 1093 aaPredicted RBP5.32□□□□□ -1.56
CHD8-212ENST00000557329 SESN2P58004 480 aaPredicted RBP5.32□□□□□ -1.56
CHD8-212ENST00000557329 EVA1CP58658 441 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 PIK3R6Q5UE93 754 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 CDCA2Q69YH5 1023 aaPredicted RBP5.32□□□□□ -1.56
CHD8-212ENST00000557329 ARHGEF18Q6ZSZ5 1173 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 RALYLQ86SE5 291 aaKnown RBP5.32□□□□□ -1.56
CHD8-212ENST00000557329 ADGRG2Q8IZP9 1017 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 ZCCHC14Q8WYQ9 949 aaKnown RBP5.32□□□□□ -1.56
CHD8-212ENST00000557329 DDX1Q92499 740 aaKnown RBP5.32□□□□□ -1.56
CHD8-212ENST00000557329 LPPQ93052 612 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 BORCS6Q96GS4 357 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 GBP4Q96PP9 640 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 FOXB1Q99853 325 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 KATNBL1Q9H079 304 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 SEC61A2Q9H9S3 476 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 MRPL42Q9Y6G3 142 aaKnown RBP5.32□□□□□ -1.56
CHD8-212ENST00000557329 UNC13BO14795 1591 aa5.32□□□□□ -1.56
CHD8-212ENST00000557329 NOS1P29475 1434 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 MYOM3Q5VTT5 1437 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 ANKRD30AQ9BXX3 1397 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 NINLQ9Y2I6 1382 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 PTPDC1A2A3K4 754 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 GOLGA6L22H0YM25 854 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 GLRX3O76003 335 aaKnown RBP5.31□□□□□ -1.56
CHD8-212ENST00000557329 ZBTB48P10074 688 aaPredicted RBP5.31□□□□□ -1.56
CHD8-212ENST00000557329 COL6A1P12109 1028 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 APEX1P27695 318 aaKnown RBP5.31□□□□□ -1.56
CHD8-212ENST00000557329 ETV4P43268 484 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 GLRBP48167 497 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 NEK4P51957 841 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 PPP2CBP62714 309 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 PPP2CAP67775 309 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 ROM1Q03395 351 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 USP10Q14694 798 aaKnown RBP5.31□□□□□ -1.56
CHD8-212ENST00000557329 TMEM132BQ14DG7 1078 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 EPHA7Q15375 998 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 SKOR2Q2VWA4 1001 aaPredicted RBP5.31□□□□□ -1.56
CHD8-212ENST00000557329 WDR72Q3MJ13 1102 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 LRRTM3Q86VH5 581 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 ZDHHC14Q8IZN3 488 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 TTC9BQ8N6N2 239 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 STPG3Q8N7X2 389 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 SYT8Q8NBV8 401 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 ASB15Q8WXK1 588 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 SYT17Q9BSW7 474 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 OR10A5Q9H207 317 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 SLC39A2Q9NP94 309 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 BTBD7Q9P203 1132 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 VWA7Q9Y334 891 aa5.31□□□□□ -1.56
CHD8-212ENST00000557329 LAMTOR5O43504 91 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms