RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 CXCL17Q6UXB2 119 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 DNAJC14Q6Y2X3 702 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-247ENST00000557311 NOL8Q76FK4 1167 aaKnown RBP5.79□□□□□ -1.48
ATXN3-247ENST00000557311 REPS2Q8NFH8 660 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 ARNTL2Q8WYA1 636 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 NOC4LQ9BVI4 516 aaKnown RBP5.79□□□□□ -1.48
ATXN3-247ENST00000557311 TRPV6Q9H1D0 765 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 KANSL2Q9H9L4 492 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 CERS4Q9HA82 394 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 LRRC4CQ9HCJ2 640 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 CD320Q9NPF0 282 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 FBXO28Q9NVF7 368 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 LMCD1Q9NZU5 365 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 MYH2Q9UKX2 1941 aa5.79□□□□□ -1.48
ATXN3-247ENST00000557311 UMODL1Q5DID0 1318 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 RLFQ13129 1914 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 ATP2A1O14983 1001 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 ZBED4O75132 1171 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 SURF6O75683 361 aaKnown RBP5.78□□□□□ -1.48
ATXN3-247ENST00000557311 EEF2P13639 858 aaKnown RBP5.78□□□□□ -1.48
ATXN3-247ENST00000557311 AKR1B1P15121 316 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 ATP8B2P98198 1209 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 BEX3Q00994 111 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 TAP1Q03518 808 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 GRB10Q13322 594 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 TTLL4Q14679 1199 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 FSCN1Q16658 493 aaKnown RBP5.78□□□□□ -1.48
ATXN3-247ENST00000557311 KRT40Q6A162 431 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 SNRNP48Q6IEG0 339 aaKnown RBP5.78□□□□□ -1.48
ATXN3-247ENST00000557311 TTBK2Q6IQ55 1244 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 SV2BQ7L1I2 683 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 ARMCX2Q7L311 632 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 FAM178BQ8IXR5 827 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 SMYD4Q8IYR2 804 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-247ENST00000557311 ANKRD35Q8N283 1001 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 PRPF38AQ8NAV1 312 aaKnown RBP5.78□□□□□ -1.48
ATXN3-247ENST00000557311 GIPC2Q8TF65 315 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 VWCEQ96DN2 955 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 DYNLL2Q96FJ2 89 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 FANCD2OSQ96PS1 177 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 UIMC1Q96RL1 719 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 SLC9A7Q96T83 725 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 SLF1Q9BQI6 1058 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 AP5M1Q9H0R1 490 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 CCDC8Q9H0W5 538 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-247ENST00000557311 WNT8AQ9H1J5 351 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 SEMA6CQ9H3T2 930 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 ANTXR1Q9H6X2 564 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 DCP1AQ9NPI6 582 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-247ENST00000557311 CRIM1Q9NZV1 1036 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 FBXO40Q9UH90 709 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 DBNLQ9UJU6 430 aaKnown RBP5.78□□□□□ -1.48
ATXN3-247ENST00000557311 Q9Y3F1 56 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 RIPK3Q9Y572 518 aa5.78□□□□□ -1.48
ATXN3-247ENST00000557311 CTDP1Q9Y5B0 961 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-247ENST00000557311 GRIN2DO15399 1336 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-247ENST00000557311 EPOPA6NHQ4 379 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 ASB14A6NK59 587 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 IPO8O15397 1037 aaKnown RBP5.77□□□□□ -1.49
ATXN3-247ENST00000557311 DYNC1LI2O43237 492 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-247ENST00000557311 ADCY6O43306 1168 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 SORBS3O60504 671 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 B4GALT4O60513 344 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 APPP05067 770 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 CYP2D6P10635 497 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 RFC2P35250 354 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 CDK8P49336 464 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 TAGLNQ01995 201 aaKnown RBP5.77□□□□□ -1.49
ATXN3-247ENST00000557311 NHLH1Q02575 133 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 TTF1Q15361 905 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-247ENST00000557311 LEXMQ3ZCV2 418 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 FAM83BQ5T0W9 1011 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 SLC9C2Q5TAH2 1124 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 IQSEC1Q6DN90 963 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 PDZD3Q86UT5 571 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 C12orf40Q86WS4 652 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 ZDHHC13Q8IUH4 622 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 HERC6Q8IVU3 1022 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 AMOTL1Q8IY63 956 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 CCDC144CPQ8IYA2 1237 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 TRMT2AQ8IZ69 625 aaKnown RBP5.77□□□□□ -1.49
ATXN3-247ENST00000557311 CPXCR1Q8N123 301 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 CHST13Q8NET6 341 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 SSH3Q8TE77 659 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 EAF2Q96CJ1 260 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-247ENST00000557311 SCLYQ96I15 445 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 FBXL18Q96ME1 805 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 KATNBL1Q9H079 304 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 ALDH8A1Q9H2A2 487 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-247ENST00000557311 ATP8A2Q9NTI2 1148 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 KCNG1Q9UIX4 513 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 CYP8B1Q9UNU6 501 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 DNAH12Q6ZR08 3092 aa5.77□□□□□ -1.49
ATXN3-247ENST00000557311 NCOR1O75376 2440 aa5.76□□□□□ -1.49
ATXN3-247ENST00000557311 PIEZO1Q92508 2521 aa5.76□□□□□ -1.49
ATXN3-247ENST00000557311 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-247ENST00000557311 PRAMEF27A3QJZ7 478 aa5.76□□□□□ -1.49
ATXN3-247ENST00000557311 F5H6K3 240 aa5.76□□□□□ -1.49
ATXN3-247ENST00000557311 LPXNO60711 386 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms