RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 RNF149Q8NC42 400 aa15.08■□□□□ 0
SHMT2-228ENST00000557302 KCNG4Q8TDN1 519 aa15.08■□□□□ 0
SHMT2-228ENST00000557302 ASAP3Q8TDY4 903 aa15.08■□□□□ 0
SHMT2-228ENST00000557302 PBX4Q9BYU1 374 aa15.08■□□□□ 0
SHMT2-228ENST00000557302 TMX1Q9H3N1 280 aa15.08■□□□□ 0
SHMT2-228ENST00000557302 GPRC5CQ9NQ84 441 aa15.08■□□□□ 0
SHMT2-228ENST00000557302 CCDC39Q9UFE4 941 aa15.08■□□□□ 0
SHMT2-228ENST00000557302 MSRAQ9UJ68 235 aa15.08■□□□□ 0
SHMT2-228ENST00000557302 DENND3A2RUS2 1198 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 ENPP3O14638 875 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 CSDE1O75534 798 aaKnown RBP15.07■□□□□ 0
SHMT2-228ENST00000557302 SSBP05455 408 aaKnown RBP eCLIP15.07■□□□□ 0
SHMT2-228ENST00000557302 PLA2G4BP0C869 781 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 PLCG1P19174 1290 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 GLRA2P23416 452 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 DNAJB2P25686 324 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 PHKA2P46019 1235 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 RABGGTBP53611 331 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 USP49Q70CQ1 688 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 SRGAP1Q7Z6B7 1085 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 TMCO2Q7Z6W1 182 aaPredicted RBP15.07■□□□□ 0
SHMT2-228ENST00000557302 SYT2Q8N9I0 419 aaPredicted RBP15.07■□□□□ 0
SHMT2-228ENST00000557302 LINC01599Q8WXQ3 324 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 KIFAP3Q92845 792 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 ZBED2Q9BTP6 218 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 RUSC1Q9BVN2 902 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 TSPYL2Q9H2G4 693 aaPredicted RBP15.07■□□□□ 0
SHMT2-228ENST00000557302 IFT122Q9HBG6 1241 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 PCDHA11Q9Y5I1 949 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 MYH15Q9Y2K3 1946 aa15.07■□□□□ 0
SHMT2-228ENST00000557302 TLL1O43897 1013 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 CUTAO60888 179 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 GJB5O95377 273 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 NCLP19338 710 aaKnown RBP15.06■□□□□ 0
SHMT2-228ENST00000557302 FGFR4P22455 802 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 DDIT3P35638 169 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 PBX2P40425 430 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 ME1P48163 572 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 PTENP60484 403 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 KRT85P78386 507 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 CAPSQ13938 189 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 RINT1Q6NUQ1 792 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 GPR153Q6NV75 609 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 FAM117BQ6P1L5 589 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 CATSPER4Q7RTX7 472 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 RTN4RL1Q86UN2 441 aaPredicted RBP15.06■□□□□ 0
SHMT2-228ENST00000557302 ADAM2Q99965 735 aa15.06■□□□□ 0
SHMT2-228ENST00000557302 MICAL3Q7RTP6 2002 aa15.05■□□□□ 0
SHMT2-228ENST00000557302 LRRIQ4A6NIV6 560 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 MGEA5O60502 916 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 UPP2O95045 317 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 ZSCAN20P17040 1043 aaPredicted RBP15.05■□□□□ -0
SHMT2-228ENST00000557302 SLC12A3P55017 1021 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 POU5F1BQ06416 359 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 PPP2R5AQ15172 486 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 C1orf186Q6ZWK4 172 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 RAD54LQ92698 747 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 TOP1MTQ969P6 601 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 TIFAQ96CG3 184 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 IFT74Q96LB3 600 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 TIPINQ9BVW5 301 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 NFKBIZQ9BYH8 718 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 C1orf112Q9NSG2 853 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 BLOC1S4Q9NUP1 217 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 KCND2Q9NZV8 630 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 STK17AQ9UEE5 414 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 RCOR1Q9UKL0 485 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 YBX2Q9Y2T7 364 aaKnown RBP15.05■□□□□ -0
SHMT2-228ENST00000557302 LOXHD1Q8IVV2 1947 aa15.05■□□□□ -0
SHMT2-228ENST00000557302 INO80B-WBP1J3KQ70 363 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 HIP1RO75146 1068 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 MYOGP15173 224 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 GUCY2CP25092 1073 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 DHX8Q14562 1220 aaKnown RBP15.04■□□□□ -0
SHMT2-228ENST00000557302 DSC3Q14574 896 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 PCBP1Q15365 356 aaKnown RBP eCLIP15.04■□□□□ -0
SHMT2-228ENST00000557302 AXDND1Q5T1B0 1012 aaPredicted RBP15.04■□□□□ -0
SHMT2-228ENST00000557302 ZNF697Q5TEC3 545 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 RRAGBQ5VZM2 374 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 CCDC73Q6ZRK6 1079 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 SLC24A5Q71RS6 500 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 GPBP1Q86WP2 473 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 IFNLR1Q8IU57 520 aaPredicted RBP15.04■□□□□ -0
SHMT2-228ENST00000557302 ZBTB8OSQ8IWT0 167 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 LRRC15Q8TF66 581 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 BSNDQ8WZ55 320 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 LARP4BQ92615 738 aaKnown RBP15.04■□□□□ -0
SHMT2-228ENST00000557302 SPATA32Q96LK8 384 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 DRC1Q96MC2 740 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 RAD9AQ99638 391 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 C2orf40Q9H1Z8 148 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 NKX2-4Q9H2Z4 354 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 MINDY3Q9H8M7 445 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 POLD4Q9HCU8 107 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 CHST12Q9NRB3 414 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 RGS18Q9NS28 235 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 PCDHA7Q9UN72 937 aa15.04■□□□□ -0
SHMT2-228ENST00000557302 TMEM265A0A087WTH1 108 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 ERLIN2O94905 339 aa15.03■□□□□ -0
SHMT2-228ENST00000557302 STAG3L1P0CL83 205 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms