RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CNTNAP3Q9BZ76 1288 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 IGSF9Q9P2J2 1179 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 FBXL21Q9UKT6 434 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 CACNA1BQ00975 2339 aa14.24□□□□□ -0.13
PSEN1-221ENST00000557293 CCDC69A6NI79 296 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 IPO5O00410 1097 aaKnown RBP14.23□□□□□ -0.13
PSEN1-221ENST00000557293 SGSM2O43147 1006 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 CFHP08603 1231 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 CYP3A4P08684 503 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 CNPP09543 421 aaKnown RBP14.23□□□□□ -0.13
PSEN1-221ENST00000557293 SP9P0CG40 484 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 GIT2Q14161 759 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 LETM2Q2VYF4 491 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 TTC22Q5TAA0 569 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 POTEGQ6S5H5 508 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 NFXL1Q6ZNB6 911 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 CCDC149Q6ZUS6 474 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 TEX2Q8IWB9 1127 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 CKAP2LQ8IYA6 745 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 SUMF1Q8NBK3 374 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 LPPQ93052 612 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 TMEM87BQ96K49 555 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 TRAIPQ9BWF2 469 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 MRPL9Q9BYD2 267 aaKnown RBP14.23□□□□□ -0.13
PSEN1-221ENST00000557293 SFXN1Q9H9B4 322 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 TBC1D13Q9NVG8 400 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 DNAJB4Q9UDY4 337 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 AKT3Q9Y243 479 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 C2orf16Q68DN1 1984 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 CEP250Q9BV73 2442 aa14.23□□□□□ -0.13
PSEN1-221ENST00000557293 CNTNAP5Q8WYK1 1306 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 ZC3H11AO75152 810 aaKnown RBP eCLIP14.22□□□□□ -0.13
PSEN1-221ENST00000557293 OFD1O75665 1012 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 CALM1P0DP23 149 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 CALM2P0DP24 149 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 CALM3P0DP25 149 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 PHKA2P46019 1235 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 SLC11A1P49279 550 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 NAPAP54920 295 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 DRP2Q13474 957 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 BMS1Q14692 1282 aaKnown RBP14.22□□□□□ -0.13
PSEN1-221ENST00000557293 ZNF746Q6NUN9 644 aaPredicted RBP14.22□□□□□ -0.13
PSEN1-221ENST00000557293 CASC1Q6TDU7 716 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 C15orf39Q6ZRI6 1047 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 PPFIBP1Q86W92 1011 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 ZNF280BQ86YH2 543 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 MAML2Q8IZL2 1156 aaPredicted RBP14.22□□□□□ -0.13
PSEN1-221ENST00000557293 GABBR1Q9UBS5 961 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 RBM8AQ9Y5S9 174 aaKnown RBP14.22□□□□□ -0.13
PSEN1-221ENST00000557293 FANCMQ8IYD8 2048 aa14.22□□□□□ -0.13
PSEN1-221ENST00000557293 KMT2BQ9UMN6 2715 aaPredicted RBP14.21□□□□□ -0.13
PSEN1-221ENST00000557293 SMCO2A6NFE2 343 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 POTEMA6NI47 508 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 EDIL3O43854 480 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 DDHD2O94830 711 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 GLULP15104 373 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 MCM5P33992 734 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 ZNF76P36508 570 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 AAMPQ13685 434 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 LONRF3Q496Y0 759 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 ZNF710Q8N1W2 664 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 CMASQ8NFW8 434 aaPredicted RBP14.21□□□□□ -0.13
PSEN1-221ENST00000557293 RUFY2Q8WXA3 655 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 MYADMQ96S97 322 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 CEP89Q96ST8 783 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 MAP7D2Q96T17 732 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 LRRC2Q9BYS8 371 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 TBC1D17Q9HA65 648 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 CHST12Q9NRB3 414 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 TBC1D22BQ9NU19 505 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 PCDHA10Q9Y5I2 948 aa14.21□□□□□ -0.13
PSEN1-221ENST00000557293 V9GY48 417 aaPredicted RBP14.21□□□□□ -0.13
PSEN1-221ENST00000557293 MYH9P35579 1960 aaKnown RBP14.21□□□□□ -0.13
PSEN1-221ENST00000557293 CACNA1IQ9P0X4 2223 aa14.21□□□□□ -0.14
PSEN1-221ENST00000557293 GPR179Q6PRD1 2367 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 STK25O00506 426 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 ZNF623O75123 536 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 PAPLNO95428 1278 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 DCNP07585 359 aaKnown RBP14.2□□□□□ -0.14
PSEN1-221ENST00000557293 PSAPP07602 524 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 KLRC2P26717 231 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 AFF1P51825 1210 aaKnown RBP14.2□□□□□ -0.14
PSEN1-221ENST00000557293 ADCY7P51828 1080 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 TBC1D8BQ0IIM8 1120 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 AP3B2Q13367 1082 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 TARBP2Q15633 366 aaKnown RBP14.2□□□□□ -0.14
PSEN1-221ENST00000557293 NOMO2Q5JPE7 1267 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 JAKMIP3Q5VZ66 844 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 PHLDB3Q6NSJ2 640 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 PPP1R18Q6NYC8 613 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 SGMS1Q86VZ5 419 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 TMEM87AQ8NBN3 555 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 RUBCNQ92622 972 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 ZNF577Q9BSK1 485 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 RHOBTB2Q9BYZ6 727 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 WDR6Q9NNW5 1121 aaKnown RBP14.2□□□□□ -0.14
PSEN1-221ENST00000557293 DACT1Q9NYF0 836 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 EPS15L1Q9UBC2 864 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 CA14Q9ULX7 337 aa14.2□□□□□ -0.14
PSEN1-221ENST00000557293 CEP131Q9UPN4 1083 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms