RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 ZNF410Q86VK4 478 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 RHPN2Q8IUC4 686 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 NPAS4Q8IUM7 802 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 KSR1Q8IVT5 923 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 PIGOQ8TEQ8 1089 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 NLRP7Q8WX94 980 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 NACC1Q96RE7 527 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 ADAM2Q99965 735 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 XPNPEP1Q9NQW7 623 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 CFAP45Q9UL16 551 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 RBM19Q9Y4C8 960 aaKnown RBP25.04■■□□□ 1.6
PABPN1-206ENST00000556809 ATP6V1DQ9Y5K8 247 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 RALGAPA2Q2PPJ7 1873 aa25.04■■□□□ 1.6
PABPN1-206ENST00000556809 A0A087WZ62 844 aa25.03■■□□□ 1.6
PABPN1-206ENST00000556809 C9IYK1 514 aa25.03■■□□□ 1.6
PABPN1-206ENST00000556809 LINC00271P0C7V0 271 aa25.03■■□□□ 1.6
PABPN1-206ENST00000556809 SARSP49591 514 aaKnown RBP25.03■■□□□ 1.6
PABPN1-206ENST00000556809 FAM189BP81408 668 aa25.03■■□□□ 1.6
PABPN1-206ENST00000556809 EMC2Q15006 297 aa25.03■■□□□ 1.6
PABPN1-206ENST00000556809 FDXACB1Q9BRP7 624 aaPredicted RBP25.03■■□□□ 1.6
PABPN1-206ENST00000556809 C17orf80Q9BSJ5 609 aa25.03■■□□□ 1.6
PABPN1-206ENST00000556809 C1orf112Q9NSG2 853 aa25.03■■□□□ 1.6
PABPN1-206ENST00000556809 KIAA1024Q9UPX6 916 aa25.03■■□□□ 1.6
PABPN1-206ENST00000556809 A0A087WWV3 80 aa25.02■■□□□ 1.6
PABPN1-206ENST00000556809 SPTLC2O15270 562 aa25.02■■□□□ 1.6
PABPN1-206ENST00000556809 GAS2O43903 313 aaKnown RBP25.02■■□□□ 1.6
PABPN1-206ENST00000556809 CSDE1O75534 798 aaKnown RBP25.02■■□□□ 1.6
PABPN1-206ENST00000556809 RARRES1P49788 294 aa25.02■■□□□ 1.6
PABPN1-206ENST00000556809 GRB10Q13322 594 aa25.02■■□□□ 1.6
PABPN1-206ENST00000556809 SLC24A5Q71RS6 500 aa25.02■■□□□ 1.6
PABPN1-206ENST00000556809 KRI1Q8N9T8 703 aaKnown RBP25.02■■□□□ 1.6
PABPN1-206ENST00000556809 PRPF31Q8WWY3 499 aaKnown RBP25.02■■□□□ 1.6
PABPN1-206ENST00000556809 TMEM143Q96AN5 459 aa25.02■■□□□ 1.6
PABPN1-206ENST00000556809 CCDC43Q96MW1 224 aaKnown RBP25.02■■□□□ 1.6
PABPN1-206ENST00000556809 GCOM2Q9BZD3 368 aaPredicted RBP25.02■■□□□ 1.6
PABPN1-206ENST00000556809 CSRNP2Q9H175 543 aa25.02■■□□□ 1.6
PABPN1-206ENST00000556809 IFT122Q9HBG6 1241 aa25.02■■□□□ 1.6
PABPN1-206ENST00000556809 DDX19AQ9NUU7 478 aaKnown RBP25.02■■□□□ 1.6
PABPN1-206ENST00000556809 DBR1Q9UK59 544 aaKnown RBP25.02■■□□□ 1.6
PABPN1-206ENST00000556809 COL4A3BPQ9Y5P4 624 aa25.02■■□□□ 1.6
PABPN1-206ENST00000556809 ADGRA3Q8IWK6 1321 aa25.02■■□□□ 1.6
PABPN1-206ENST00000556809 FNDC1Q4ZHG4 1894 aaPredicted RBP25.01■■□□□ 1.59
PABPN1-206ENST00000556809 DENND3A2RUS2 1198 aa25.01■■□□□ 1.59
PABPN1-206ENST00000556809 PPP6R2O75170 966 aa25.01■■□□□ 1.59
PABPN1-206ENST00000556809 STAG3L1P0CL83 205 aa25.01■■□□□ 1.59
PABPN1-206ENST00000556809 IGFBP4P22692 258 aa25.01■■□□□ 1.59
PABPN1-206ENST00000556809 UBA7P41226 1012 aa25.01■■□□□ 1.59
PABPN1-206ENST00000556809 CABP7Q86V35 215 aa25.01■■□□□ 1.59
PABPN1-206ENST00000556809 SCLT1Q96NL6 688 aa25.01■■□□□ 1.59
PABPN1-206ENST00000556809 BMP2KQ9NSY1 1161 aaPredicted RBP25.01■■□□□ 1.59
PABPN1-206ENST00000556809 MTUS1Q9ULD2 1270 aa25.01■■□□□ 1.59
PABPN1-206ENST00000556809 MTCH2Q9Y6C9 303 aa25.01■■□□□ 1.59
PABPN1-206ENST00000556809 SLC26A4O43511 780 aa25■■□□□ 1.59
PABPN1-206ENST00000556809 DGAT1O75907 488 aa25■■□□□ 1.59
PABPN1-206ENST00000556809 FGFR4P22455 802 aa25■■□□□ 1.59
PABPN1-206ENST00000556809 ZRSR1Q15695 479 aaKnown RBP25■■□□□ 1.59
PABPN1-206ENST00000556809 HYIQ5T013 277 aa25■■□□□ 1.59
PABPN1-206ENST00000556809 FIBCD1Q8N539 461 aa25■■□□□ 1.59
PABPN1-206ENST00000556809 TCP11Q8WWU5 503 aa25■■□□□ 1.59
PABPN1-206ENST00000556809 PSPC1Q8WXF1 523 aaKnown RBP25■■□□□ 1.59
PABPN1-206ENST00000556809 SAMD11Q96NU1 681 aa25■■□□□ 1.59
PABPN1-206ENST00000556809 CLIC6Q96NY7 704 aa25■■□□□ 1.59
PABPN1-206ENST00000556809 MTRQ99707 1265 aa25■■□□□ 1.59
PABPN1-206ENST00000556809 KRT85P78386 507 aa24.99■■□□□ 1.59
PABPN1-206ENST00000556809 LAMTOR4Q0VGL1 99 aa24.99■■□□□ 1.59
PABPN1-206ENST00000556809 EPC2Q52LR7 807 aa24.99■■□□□ 1.59
PABPN1-206ENST00000556809 PRRC2BQ5JSZ5 2229 aaKnown RBP24.99■■□□□ 1.59
PABPN1-206ENST00000556809 KCNG4Q8TDN1 519 aa24.99■■□□□ 1.59
PABPN1-206ENST00000556809 CLP1Q92989 425 aaKnown RBP24.99■■□□□ 1.59
PABPN1-206ENST00000556809 CDK5RAP3Q96JB5 506 aa24.99■■□□□ 1.59
PABPN1-206ENST00000556809 NLRP4Q96MN2 994 aa24.99■■□□□ 1.59
PABPN1-206ENST00000556809 PNMA5Q96PV4 448 aa24.99■■□□□ 1.59
PABPN1-206ENST00000556809 KIAA1671Q9BY89 1806 aa24.99■■□□□ 1.59
PABPN1-206ENST00000556809 NT5C3AQ9H0P0 336 aa24.99■■□□□ 1.59
PABPN1-206ENST00000556809 ELAC1Q9H777 363 aaKnown RBP24.99■■□□□ 1.59
PABPN1-206ENST00000556809 CIZ1Q9ULV3 898 aaPredicted RBP24.99■■□□□ 1.59
PABPN1-206ENST00000556809 ASAP2O43150 1006 aa24.98■■□□□ 1.59
PABPN1-206ENST00000556809 NCLP19338 710 aaKnown RBP24.98■■□□□ 1.59
PABPN1-206ENST00000556809 SPECC1Q5M775 1068 aa24.98■■□□□ 1.59
PABPN1-206ENST00000556809 TMEM192Q8IY95 271 aa24.98■■□□□ 1.59
PABPN1-206ENST00000556809 CMTR2Q8IYT2 770 aaKnown RBP24.98■■□□□ 1.59
PABPN1-206ENST00000556809 GDPD5Q8WTR4 605 aa24.98■■□□□ 1.59
PABPN1-206ENST00000556809 CHAMP1Q96JM3 812 aa24.98■■□□□ 1.59
PABPN1-206ENST00000556809 INO80BQ9C086 356 aaPredicted RBP24.98■■□□□ 1.59
PABPN1-206ENST00000556809 CCSER1Q9C0I3 900 aa24.98■■□□□ 1.59
PABPN1-206ENST00000556809 ATP6V0A4Q9HBG4 840 aa24.98■■□□□ 1.59
PABPN1-206ENST00000556809 DNM3Q9UQ16 869 aa24.98■■□□□ 1.59
PABPN1-206ENST00000556809 PCDHB7Q9Y5E2 793 aa24.98■■□□□ 1.59
PABPN1-206ENST00000556809 ARHGEF35A5YM69 484 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 ZSCAN20P17040 1043 aaPredicted RBP24.97■■□□□ 1.59
PABPN1-206ENST00000556809 SFPQP23246 707 aaKnown RBP eCLIP24.97■■□□□ 1.59
PABPN1-206ENST00000556809 ARL2P36404 184 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 GATMP50440 423 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 BTG3Q14201 252 aaPredicted RBP24.97■■□□□ 1.59
PABPN1-206ENST00000556809 TMEM119Q4V9L6 283 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 KCTD17Q8N5Z5 321 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 FBXO22Q8NEZ5 403 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 SYMPKQ92797 1274 aaKnown RBP24.97■■□□□ 1.59
PABPN1-206ENST00000556809 CALML4Q96GE6 196 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 EPSTI1Q96J88 318 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms