RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 HTRA4P83105 476 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 SLC39A14Q15043 492 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 ECM1Q16610 540 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 SLC24A5Q71RS6 500 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 CABP7Q86V35 215 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 NPAS4Q8IUM7 802 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 GBF1Q92538 1859 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 USP28Q96RU2 1077 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 FDXACB1Q9BRP7 624 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 MMTAG2Q9BU76 263 aaKnown RBP11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 TIPINQ9BVW5 301 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 NFKBIZQ9BYH8 718 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 BHMT2Q9H2M3 363 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 ZNF576Q9H609 170 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 IFT122Q9HBG6 1241 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 CHST12Q9NRB3 414 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 RGS18Q9NS28 235 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 DACT1Q9NYF0 836 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 DAXXQ9UER7 740 aaPredicted RBP11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 MYH15Q9Y2K3 1946 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 YBX2Q9Y2T7 364 aaKnown RBP11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 SRPRBQ9Y5M8 271 aaKnown RBP11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 CLIC4Q9Y696 253 aa11.73□□□□□ -0.53
MTHFD1-214ENST00000556771 YEATS4O95619 227 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 CDC25AP30304 524 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 TXLNAP40222 546 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 SARSP49591 514 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 DSC3Q14574 896 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 PPP2R5AQ15172 486 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 STK38Q15208 465 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 TMEM119Q4V9L6 283 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 PPP2R2DQ66LE6 453 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 FAM173BQ6P4H8 233 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 RNF149Q8NC42 400 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 RSPH1Q8WYR4 309 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 KIFAP3Q92845 792 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 YME1L1Q96TA2 773 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 ADAM2Q99965 735 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 TRAIPQ9BWF2 469 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 POLR3FQ9H1D9 316 aaPredicted RBP11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 NKX2-4Q9H2Z4 354 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 TMX1Q9H3N1 280 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 SEMA6BQ9H3T3 888 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 ELAC1Q9H777 363 aaKnown RBP11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 MTMR10Q9NXD2 777 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 KCND2Q9NZV8 630 aa11.72□□□□□ -0.53
MTHFD1-214ENST00000556771 C9IYK1 514 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 PPP6R2O75170 966 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 CA3P07451 260 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 SRGAP2CP0DJJ0 459 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 SKIP12755 728 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 GLRA2P23416 452 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 PTENP60484 403 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 NCBP1Q09161 790 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 GRB10Q13322 594 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 CATSPER4Q7RTX7 472 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 RTN4RL1Q86UN2 441 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 KSR1Q8IVT5 923 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 LINC00301Q8NCQ3 95 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 RASSF8Q8NHQ8 419 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 SP7Q8TDD2 431 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 LINC01599Q8WXQ3 324 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 ZNF668Q96K58 619 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 DRC1Q96MC2 740 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 SAMD11Q96NU1 681 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 CCSER1Q9C0I3 900 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 TTYH1Q9H313 450 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 CCDC39Q9UFE4 941 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 FBXO2Q9UK22 296 aaPredicted RBP11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 CFAP45Q9UL16 551 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 LRFN2Q9ULH4 789 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 ATP6V1DQ9Y5K8 247 aa11.71□□□□□ -0.53
MTHFD1-214ENST00000556771 PHLPP2Q6ZVD8 1323 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 A0A087WWV3 80 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 E9PMD0 336 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 SPTLC2O15270 562 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 HOXA2O43364 376 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 MGEA5O60502 916 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 DGKIO75912 1065 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 ERLIN2O94905 339 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 UPP2O95045 317 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 BRD1O95696 1058 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 MYOGP15173 224 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 GUCY2CP25092 1073 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 MARCKSP29966 332 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 AXLP30530 894 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 NAMPTP43490 491 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 RAB27AP51159 221 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 FAM189BP81408 668 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 CEBPZQ03701 1054 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 CAPSQ13938 189 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 ZRSR1Q15695 479 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 FAM102BQ5T8I3 360 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 FAM117BQ6P1L5 589 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 CRIPAKQ8N1N5 446 aa11.7□□□□□ -0.54
MTHFD1-214ENST00000556771 SYT2Q8N9I0 419 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms