RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 CYP11B2P19099 503 aa18.97■□□□□ 0.63
PSEN1-217ENST00000556533 SFPQP23246 707 aaKnown RBP eCLIP18.97■□□□□ 0.63
PSEN1-217ENST00000556533 PHKA2P46019 1235 aa18.97■□□□□ 0.63
PSEN1-217ENST00000556533 GRB10Q13322 594 aa18.97■□□□□ 0.63
PSEN1-217ENST00000556533 SLC39A14Q15043 492 aa18.97■□□□□ 0.63
PSEN1-217ENST00000556533 KCNK18Q7Z418 384 aa18.97■□□□□ 0.63
PSEN1-217ENST00000556533 NT5C3AQ9H0P0 336 aa18.97■□□□□ 0.63
PSEN1-217ENST00000556533 CERS4Q9HA82 394 aa18.97■□□□□ 0.63
PSEN1-217ENST00000556533 IFT122Q9HBG6 1241 aa18.97■□□□□ 0.63
PSEN1-217ENST00000556533 FBXO2Q9UK22 296 aaPredicted RBP18.97■□□□□ 0.63
PSEN1-217ENST00000556533 INSL6Q9Y581 213 aa18.97■□□□□ 0.63
PSEN1-217ENST00000556533 GLRA2P23416 452 aa18.96■□□□□ 0.63
PSEN1-217ENST00000556533 GRIN2CQ14957 1233 aa18.96■□□□□ 0.63
PSEN1-217ENST00000556533 EPSTI1Q96J88 318 aa18.96■□□□□ 0.63
PSEN1-217ENST00000556533 RGS18Q9NS28 235 aa18.96■□□□□ 0.63
PSEN1-217ENST00000556533 MTMR10Q9NXD2 777 aa18.96■□□□□ 0.63
PSEN1-217ENST00000556533 PCDHB7Q9Y5E2 793 aa18.96■□□□□ 0.63
PSEN1-217ENST00000556533 SRPRBQ9Y5M8 271 aaKnown RBP18.96■□□□□ 0.63
PSEN1-217ENST00000556533 TMEM265A0A087WTH1 108 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 LRRIQ4A6NIV6 560 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 ARHGEF15O94989 841 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 STAG3L1P0CL83 205 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 NASPP49321 788 aaPredicted RBP18.95■□□□□ 0.62
PSEN1-217ENST00000556533 SARSP49591 514 aaKnown RBP18.95■□□□□ 0.62
PSEN1-217ENST00000556533 CAPSQ13938 189 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 DHX8Q14562 1220 aaKnown RBP18.95■□□□□ 0.62
PSEN1-217ENST00000556533 DSC3Q14574 896 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 KARSQ15046 597 aaKnown RBP18.95■□□□□ 0.62
PSEN1-217ENST00000556533 HYIQ5T013 277 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 USP49Q70CQ1 688 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 SLC24A5Q71RS6 500 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 SRGAP1Q7Z6B7 1085 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 KRI1Q8N9T8 703 aaKnown RBP18.95■□□□□ 0.62
PSEN1-217ENST00000556533 RNF169Q8NCN4 708 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 MINDY3Q9H8M7 445 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 C1orf112Q9NSG2 853 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 PIN4Q9Y237 131 aaKnown RBP18.95■□□□□ 0.62
PSEN1-217ENST00000556533 WDR81Q562E7 1941 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 EVPLQ92817 2033 aa18.95■□□□□ 0.62
PSEN1-217ENST00000556533 INO80B-WBP1J3KQ70 363 aa18.94■□□□□ 0.62
PSEN1-217ENST00000556533 SPTLC2O15270 562 aa18.94■□□□□ 0.62
PSEN1-217ENST00000556533 PLA2G4BP0C869 781 aa18.94■□□□□ 0.62
PSEN1-217ENST00000556533 PTENP60484 403 aa18.94■□□□□ 0.62
PSEN1-217ENST00000556533 HTRA4P83105 476 aaPredicted RBP18.94■□□□□ 0.62
PSEN1-217ENST00000556533 TAP1Q03518 808 aa18.94■□□□□ 0.62
PSEN1-217ENST00000556533 RAD51AP2Q09MP3 1159 aa18.94■□□□□ 0.62
PSEN1-217ENST00000556533 TMEM119Q4V9L6 283 aa18.94■□□□□ 0.62
PSEN1-217ENST00000556533 NPAS4Q8IUM7 802 aa18.94■□□□□ 0.62
PSEN1-217ENST00000556533 LINC00301Q8NCQ3 95 aa18.94■□□□□ 0.62
PSEN1-217ENST00000556533 CDX2Q99626 313 aaPredicted RBP18.94■□□□□ 0.62
PSEN1-217ENST00000556533 RUSC1Q9BVN2 902 aa18.94■□□□□ 0.62
PSEN1-217ENST00000556533 MTUS1Q9ULD2 1270 aa18.94■□□□□ 0.62
PSEN1-217ENST00000556533 C9IYK1 514 aa18.93■□□□□ 0.62
PSEN1-217ENST00000556533 PLCG1P19174 1290 aa18.93■□□□□ 0.62
PSEN1-217ENST00000556533 DNM1Q05193 864 aaKnown RBP18.93■□□□□ 0.62
PSEN1-217ENST00000556533 TWF2Q6IBS0 349 aaKnown RBP18.93■□□□□ 0.62
PSEN1-217ENST00000556533 RINT1Q6NUQ1 792 aa18.93■□□□□ 0.62
PSEN1-217ENST00000556533 FAM43BQ6ZT52 329 aaPredicted RBP18.93■□□□□ 0.62
PSEN1-217ENST00000556533 ARNTL2Q8WYA1 636 aa18.93■□□□□ 0.62
PSEN1-217ENST00000556533 BSNDQ8WZ55 320 aa18.93■□□□□ 0.62
PSEN1-217ENST00000556533 SYMPKQ92797 1274 aaKnown RBP18.93■□□□□ 0.62
PSEN1-217ENST00000556533 IFT74Q96LB3 600 aa18.93■□□□□ 0.62
PSEN1-217ENST00000556533 GUCD1Q96NT3 240 aa18.93■□□□□ 0.62
PSEN1-217ENST00000556533 PANK2Q9BZ23 570 aa18.93■□□□□ 0.62
PSEN1-217ENST00000556533 PRDM12Q9H4Q4 367 aa18.93■□□□□ 0.62
PSEN1-217ENST00000556533 ZDHHC9Q9Y397 364 aa18.93■□□□□ 0.62
PSEN1-217ENST00000556533 SIP14410 1827 aa18.93■□□□□ 0.62
PSEN1-217ENST00000556533 SLC26A4O43511 780 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 ERLIN2O94905 339 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 BRD1O95696 1058 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 LIG1P18858 919 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 NCLP19338 710 aaKnown RBP18.92■□□□□ 0.62
PSEN1-217ENST00000556533 TXLNAP40222 546 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 GATMP50440 423 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 NCBP1Q09161 790 aaKnown RBP18.92■□□□□ 0.62
PSEN1-217ENST00000556533 BTG3Q14201 252 aaPredicted RBP18.92■□□□□ 0.62
PSEN1-217ENST00000556533 PAN2Q504Q3 1202 aaKnown RBP18.92■□□□□ 0.62
PSEN1-217ENST00000556533 SPRED2Q7Z698 418 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 SYT2Q8N9I0 419 aaPredicted RBP18.92■□□□□ 0.62
PSEN1-217ENST00000556533 DEPTORQ8TB45 409 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 MYLIPQ8WY64 445 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 KIFAP3Q92845 792 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 CCSER1Q9C0I3 900 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 CHST12Q9NRB3 414 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
PSEN1-217ENST00000556533 DACT1Q9NYF0 836 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 CCDC39Q9UFE4 941 aa18.92■□□□□ 0.62
PSEN1-217ENST00000556533 NPHP3-ACAD11A0A0J9YXS1 232 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 LINC01553A4QN01 128 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 SFI1A8K8P3 1242 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 RFXAPO00287 272 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 HIP1RO75146 1068 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 DGKIO75912 1065 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 YEATS4O95619 227 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 FAM189BP81408 668 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 POU5F1BQ06416 359 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 MCM6Q14566 821 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 LONRF3Q496Y0 759 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 C1orf186Q6ZWK4 172 aa18.91■□□□□ 0.62
PSEN1-217ENST00000556533 ZBTB8OSQ8IWT0 167 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms