RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SSBP05455 408 aaKnown RBP eCLIP15.77■□□□□ 0.12
ACTN1-219ENST00000556432 PSAPP07602 524 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 DARSP14868 501 aaKnown RBP15.77■□□□□ 0.12
ACTN1-219ENST00000556432 CHMLP26374 656 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 KLRC2P26717 231 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 GBP2P32456 591 aaPredicted RBP15.77■□□□□ 0.12
ACTN1-219ENST00000556432 PUM1Q14671 1186 aaKnown RBP eCLIP15.77■□□□□ 0.12
ACTN1-219ENST00000556432 NONOQ15233 471 aaKnown RBP eCLIP15.77■□□□□ 0.12
ACTN1-219ENST00000556432 TTC22Q5TAA0 569 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 PPP1R18Q6NYC8 613 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 ZC3H14Q6PJT7 736 aaKnown RBP15.77■□□□□ 0.12
ACTN1-219ENST00000556432 GLB1LQ6UWU2 654 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 ZNF598Q86UK7 904 aaKnown RBP15.77■□□□□ 0.12
ACTN1-219ENST00000556432 FANCBQ8NB91 859 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 IGSF21Q96ID5 467 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 FAM167AQ96KS9 214 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 ZNF577Q9BSK1 485 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 EMILIN2Q9BXX0 1053 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 IGSF9Q9P2J2 1179 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 GABBR1Q9UBS5 961 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 RBM8AQ9Y5S9 174 aaKnown RBP15.77■□□□□ 0.12
ACTN1-219ENST00000556432 IRAK3Q9Y616 596 aa15.77■□□□□ 0.12
ACTN1-219ENST00000556432 CARNS1A5YM72 827 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 SMCO2A6NFE2 343 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 FAM86B1E9PN63 330 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 CSDE1O75534 798 aaKnown RBP15.76■□□□□ 0.11
ACTN1-219ENST00000556432 FAM86B2P0C5J1 330 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 GSPT1P15170 499 aaKnown RBP15.76■□□□□ 0.11
ACTN1-219ENST00000556432 AP3B2Q13367 1082 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 AAMPQ13685 434 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 PTPN14Q15678 1187 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 LETM2Q2VYF4 491 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 TWF2Q6IBS0 349 aaKnown RBP15.76■□□□□ 0.11
ACTN1-219ENST00000556432 ZNF746Q6NUN9 644 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-219ENST00000556432 SYNE3Q6ZMZ3 975 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 ZNF710Q8N1W2 664 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 LPPQ93052 612 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 MTA3Q9BTC8 594 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 LRRC2Q9BYS8 371 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 TBC1D17Q9HA65 648 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 MAFBQ9Y5Q3 323 aaPredicted RBP15.76■□□□□ 0.11
ACTN1-219ENST00000556432 TPRP12270 2363 aaKnown RBP15.76■□□□□ 0.11
ACTN1-219ENST00000556432 DENND4AQ7Z401 1863 aa15.76■□□□□ 0.11
ACTN1-219ENST00000556432 MYH9P35579 1960 aaKnown RBP15.75■□□□□ 0.11
ACTN1-219ENST00000556432 DHX15O43143 795 aaKnown RBP15.75■□□□□ 0.11
ACTN1-219ENST00000556432 LIFRP42702 1097 aa15.75■□□□□ 0.11
ACTN1-219ENST00000556432 GPC3P51654 580 aa15.75■□□□□ 0.11
ACTN1-219ENST00000556432 NOMO2Q5JPE7 1267 aa15.75■□□□□ 0.11
ACTN1-219ENST00000556432 JAKMIP3Q5VZ66 844 aa15.75■□□□□ 0.11
ACTN1-219ENST00000556432 TYW1BQ6NUM6 668 aa15.75■□□□□ 0.11
ACTN1-219ENST00000556432 SMAP1Q8IYB5 467 aaPredicted RBP15.75■□□□□ 0.11
ACTN1-219ENST00000556432 BCL7CQ8WUZ0 217 aaPredicted RBP15.75■□□□□ 0.11
ACTN1-219ENST00000556432 RSAD2Q8WXG1 361 aa15.75■□□□□ 0.11
ACTN1-219ENST00000556432 TBC1D22BQ9NU19 505 aa15.75■□□□□ 0.11
ACTN1-219ENST00000556432 TBC1D13Q9NVG8 400 aa15.75■□□□□ 0.11
ACTN1-219ENST00000556432 WNT16Q9UBV4 365 aa15.75■□□□□ 0.11
ACTN1-219ENST00000556432 PCDHA10Q9Y5I2 948 aa15.75■□□□□ 0.11
ACTN1-219ENST00000556432 CNTNAP5Q8WYK1 1306 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 KRBA1A5PL33 1030 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 SGSM2O43147 1006 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 DCNP07585 359 aaKnown RBP15.74■□□□□ 0.11
ACTN1-219ENST00000556432 GALTP07902 379 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 PHKA2P46019 1235 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 CLCN4P51793 760 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 TBC1D8BQ0IIM8 1120 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 TEX2Q8IWB9 1127 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 RSPH1Q8WYR4 309 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 RUBCNQ92622 972 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 STAMQ92783 540 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 GLT8D2Q9H1C3 349 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 NRDE2Q9H7Z3 1164 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 NRBP2Q9NSY0 501 aa15.74■□□□□ 0.11
ACTN1-219ENST00000556432 FRYLO94915 3013 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 OTOGLQ3ZCN5 2332 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 C2CD2LO14523 706 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 KRT37O76014 449 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 OATP04181 439 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 CNPP09543 421 aaKnown RBP15.73■□□□□ 0.11
ACTN1-219ENST00000556432 MYBP10242 640 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 SLC11A1P49279 550 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 SETQ01105 290 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-219ENST00000556432 PRKCEQ02156 737 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 ELMSAN1Q6PJG2 1045 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 C15orf39Q6ZRI6 1047 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 MAP4K1Q92918 833 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 KLHL5Q96PQ7 755 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 GCOM2Q9BZD3 368 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-219ENST00000556432 MAN1C1Q9NR34 630 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 MRPL17Q9NRX2 175 aaKnown RBP15.73■□□□□ 0.11
ACTN1-219ENST00000556432 DNAJB4Q9UDY4 337 aa15.73■□□□□ 0.11
ACTN1-219ENST00000556432 PIN4Q9Y237 131 aaKnown RBP15.73■□□□□ 0.11
ACTN1-219ENST00000556432 V9GY48 417 aaPredicted RBP15.73■□□□□ 0.11
ACTN1-219ENST00000556432 IGLV3-22A0A075B6J6 115 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 N4BP1O75113 896 aaKnown RBP15.72■□□□□ 0.11
ACTN1-219ENST00000556432 SP9P0CG40 484 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 SKIP12755 728 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 SFPQP23246 707 aaKnown RBP eCLIP15.72■□□□□ 0.11
ACTN1-219ENST00000556432 PRR16Q569H4 304 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 DCLK2Q8N568 766 aa15.72■□□□□ 0.11
ACTN1-219ENST00000556432 LINC01465Q8N7H1 131 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms