RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 CYP2C9P11712 490 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 CCNE1P24864 410 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 RPL13P26373 211 aaKnown RBP10.15□□□□□ -0.78
ACTN1-218ENST00000556343 MYL5Q02045 173 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 LRRC63Q05C16 580 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 NCBP1Q09161 790 aaKnown RBP10.15□□□□□ -0.78
ACTN1-218ENST00000556343 MAPK7Q13164 816 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 ITGA7Q13683 1181 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 KNOP1Q1ED39 458 aaKnown RBP10.15□□□□□ -0.78
ACTN1-218ENST00000556343 CCSAPQ6IQ19 270 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-218ENST00000556343 FOXR2Q6PJQ5 311 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 PPP4R3CPQ6ZMV5 832 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 SESTD1Q86VW0 696 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 RHPN2Q8IUC4 686 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 ANKRD20A12PQ8NF67 263 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 ZNF507Q8TCN5 953 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 PRPF31Q8WWY3 499 aaKnown RBP10.15□□□□□ -0.78
ACTN1-218ENST00000556343 NELFBQ8WX92 580 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 P2RX5Q93086 422 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 ZNF333Q96JL9 665 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 INO80BQ9C086 356 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-218ENST00000556343 TMEM134Q9H6X4 195 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 CBX8Q9HC52 389 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 GPRC5CQ9NQ84 441 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 XPNPEP1Q9NQW7 623 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 STARD7Q9NQZ5 370 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 HDAC6Q9UBN7 1215 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 GTF2IRD1Q9UHL9 959 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 OGDHLQ9ULD0 1010 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 PHF24Q9UPV7 400 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 NOD1Q9Y239 953 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 GDAQ9Y2T3 454 aa10.15□□□□□ -0.78
ACTN1-218ENST00000556343 MBLAC1A4D2B0 266 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-218ENST00000556343 K7ERI5 159 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 SGPL1O95470 568 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 MYCP01106 439 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-218ENST00000556343 TPM2P07951 284 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 CDK11BP21127 795 aaKnown RBP10.14□□□□□ -0.79
ACTN1-218ENST00000556343 BMP6P22004 513 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 GLRA2P23416 452 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 NMT1P30419 496 aaKnown RBP10.14□□□□□ -0.79
ACTN1-218ENST00000556343 PHKA2P46019 1235 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 NPTX2P47972 431 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 NCKAP1LP55160 1127 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 GTF2BQ00403 316 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 LAMTOR4Q0VGL1 99 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 MTFR1Q15390 333 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 BMT2Q1RMZ1 405 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 SPATA1Q5VX52 437 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 EPM2AIP1Q7L775 607 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-218ENST00000556343 HAUS6Q7Z4H7 955 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 ZNF410Q86VK4 478 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 FAM114A1Q8IWE2 563 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 SMYD4Q8IYR2 804 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-218ENST00000556343 DAW1Q8N136 415 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 LRRC71Q8N4P6 559 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 ANKLE1Q8NAG6 615 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 KIAA0895Q8NCT3 520 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 LMBR1Q8WVP7 490 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 TRAPPC12Q8WVT3 735 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 SCLT1Q96NL6 688 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 GCOM2Q9BZD3 368 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-218ENST00000556343 POLD4Q9HCU8 107 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 MAGEC2Q9UBF1 373 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-218ENST00000556343 CTNND2Q9UQB3 1225 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 MAPK8IP1Q9UQF2 711 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 PCNTO95613 3336 aa10.14□□□□□ -0.79
ACTN1-218ENST00000556343 MYH9P35579 1960 aaKnown RBP10.14□□□□□ -0.79
ACTN1-218ENST00000556343 LOXHD1Q8IVV2 1947 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 ZSWIM8A7E2V4 1837 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 DENND3A2RUS2 1198 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 PDXKO00764 312 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 CETN3O15182 167 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 SLC16A4O15374 487 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 TLR3O15455 904 aaKnown RBP10.13□□□□□ -0.79
ACTN1-218ENST00000556343 PRPF6O94906 941 aaKnown RBP10.13□□□□□ -0.79
ACTN1-218ENST00000556343 GNA14O95837 355 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 MYBP10242 640 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 MRE11P49959 708 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 CLCN3P51790 818 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 STX17P56962 302 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 FKBP3Q00688 224 aaKnown RBP10.13□□□□□ -0.79
ACTN1-218ENST00000556343 SPAG1Q07617 926 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 MYBPC2Q14324 1141 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 PCBP1Q15365 356 aaKnown RBP eCLIP10.13□□□□□ -0.79
ACTN1-218ENST00000556343 PTGISQ16647 500 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 MAPK6Q16659 721 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 TMEM132AQ24JP5 1023 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 EDRF1Q3B7T1 1238 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 CENPPQ6IPU0 288 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 C11orf57Q6ZUT1 292 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-218ENST00000556343 APBB1IPQ7Z5R6 666 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-218ENST00000556343 SRGAP1Q7Z6B7 1085 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 NELFCDQ8IXH7 590 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 CCDC155Q8N6L0 562 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 AOPEPQ8N6M6 819 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 RNF149Q8NC42 400 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 RNF214Q8ND24 703 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 TMEM161BQ8NDZ6 487 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 ASAP3Q8TDY4 903 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms