RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CACNA1FO60840 1977 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 MYADML2A6NDP7 307 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 PRR33A8MZF0 331 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 RFXAPO00287 272 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 BIN1O00499 593 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 VWA5AO00534 786 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 WDR46O15213 610 aaKnown RBP5.81□□□□□ -1.48
ATXN3-239ENST00000556315 IDH1O75874 414 aaKnown RBP5.81□□□□□ -1.48
ATXN3-239ENST00000556315 GNAI2P04899 355 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 GSTP1P09211 210 aaKnown RBP5.81□□□□□ -1.48
ATXN3-239ENST00000556315 MYOGP15173 224 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 ATP2A2P16615 1042 aaKnown RBP5.81□□□□□ -1.48
ATXN3-239ENST00000556315 ARNTP27540 789 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 LIG3P49916 1009 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 NKX3-2P78367 333 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 SLFN5Q08AF3 891 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 CDK5R2Q13319 367 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 ACVR2BQ13705 512 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 TNNI3KQ59H18 835 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 DIEXFQ68CQ4 756 aaKnown RBP5.81□□□□□ -1.48
ATXN3-239ENST00000556315 SCARA3Q6AZY7 606 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 PDZD3Q86UT5 571 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 SPICE1Q8N0Z3 855 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 MAGEB6Q8N7X4 407 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 SLC43A3Q8NBI5 491 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 DDX11Q96FC9 970 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 SNX27Q96L92 541 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 UPF3AQ9H1J1 476 aaKnown RBP5.81□□□□□ -1.48
ATXN3-239ENST00000556315 ABHD16BQ9H3Z7 469 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 HIPK3Q9H422 1215 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 VCPKMTQ9H867 229 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 PIDD1Q9HB75 910 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 CBX8Q9HC52 389 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 MCM9Q9NXL9 1143 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 SWAP70Q9UH65 585 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 VAV3Q9UKW4 847 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 ZHX1Q9UKY1 873 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-239ENST00000556315 FPGT-TNNI3KV9GXZ4 949 aa5.81□□□□□ -1.48
ATXN3-239ENST00000556315 LAMA2P24043 3122 aaKnown RBP5.8□□□□□ -1.48
ATXN3-239ENST00000556315 DNAJC25-GNG10A0A024R161 153 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 FAM86C2PA6NEL3 165 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 KIF28PB7ZC32 967 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 ZEB2O60315 1214 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 PAGE1O75459 146 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 PFKMP08237 780 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 CT47B1P0C2W7 299 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-239ENST00000556315 CD8BP10966 210 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 ALADP13716 330 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 BMP6P22004 513 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 MRE11P49959 708 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 CCL23P55773 120 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 PRKCQQ04759 706 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 ICA1Q05084 483 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 ITGA7Q13683 1181 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 CCDC144BQ3MJ40 725 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 LLGL2Q6P1M3 1020 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 ERMP1Q7Z2K6 904 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 ATG4DQ86TL0 474 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-239ENST00000556315 FAM9BQ8IZU0 186 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 FAM181AQ8N9Y4 354 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 PHOSPHO2Q8TCD6 241 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 ARHGAP45Q92619 1136 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 CCDC17Q96LX7 622 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 RIOK1Q9BRS2 568 aaKnown RBP5.8□□□□□ -1.48
ATXN3-239ENST00000556315 TEX13BQ9BXU2 312 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 CRNKL1Q9BZJ0 848 aaKnown RBP5.8□□□□□ -1.48
ATXN3-239ENST00000556315 KCNH6Q9H252 994 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 ZNF214Q9UL59 606 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-239ENST00000556315 U3KQE9 123 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 MAST2Q6P0Q8 1798 aa5.8□□□□□ -1.48
ATXN3-239ENST00000556315 LTBP2Q14767 1821 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 PNMA6EA0A0J9YXQ4 647 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 CTAGE5O15320 804 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 ANP32CO43423 234 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 CA3P07451 260 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 SUPT20HL2P0C7V6 817 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 ACTN1P12814 892 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 GBP2P32456 591 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-239ENST00000556315 TNFAIP2Q03169 654 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 OS9Q13438 667 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-239ENST00000556315 TTLL4Q14679 1199 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 CXCL17Q6UXB2 119 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 AGMOQ6ZNB7 445 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 NOL8Q76FK4 1167 aaKnown RBP5.79□□□□□ -1.48
ATXN3-239ENST00000556315 REPS2Q8NFH8 660 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 ARNTL2Q8WYA1 636 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 KCNB2Q92953 911 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 TMEM74Q96NL1 305 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 DUSP23Q9BVJ7 150 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 TRPV6Q9H1D0 765 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 KANSL2Q9H9L4 492 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 CERS4Q9HA82 394 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 CD320Q9NPF0 282 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 IGSF5Q9NSI5 407 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 MBNL3Q9NUK0 354 aaKnown RBP5.79□□□□□ -1.48
ATXN3-239ENST00000556315 FBXO28Q9NVF7 368 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 LMCD1Q9NZU5 365 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 PCOLCE2Q9UKZ9 415 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 MYH2Q9UKX2 1941 aa5.79□□□□□ -1.48
ATXN3-239ENST00000556315 UMODL1Q5DID0 1318 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms