RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 SLC12A8A0AV02 714 aa5.4□□□□□ -1.54
SCFD1-218ENST00000556256 ZBTB7CA1YPR0 619 aa5.4□□□□□ -1.54
SCFD1-218ENST00000556256 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-218ENST00000556256 INO80B-WBP1J3KQ70 363 aa5.4□□□□□ -1.54
SCFD1-218ENST00000556256 RGS3P49796 1198 aa5.4□□□□□ -1.54
SCFD1-218ENST00000556256 TIGD2Q4W5G0 525 aa5.4□□□□□ -1.54
SCFD1-218ENST00000556256 PLEKHG4Q58EX7 1191 aa5.4□□□□□ -1.54
SCFD1-218ENST00000556256 KRT40Q6A162 431 aa5.4□□□□□ -1.54
SCFD1-218ENST00000556256 OVCH1Q7RTY7 1134 aa5.4□□□□□ -1.54
SCFD1-218ENST00000556256 ARL8AQ96BM9 186 aa5.4□□□□□ -1.54
SCFD1-218ENST00000556256 EXOC2Q96KP1 924 aa5.4□□□□□ -1.54
SCFD1-218ENST00000556256 CELF4Q9BZC1 486 aaKnown RBP5.4□□□□□ -1.54
SCFD1-218ENST00000556256 INO80BQ9C086 356 aaPredicted RBP5.4□□□□□ -1.54
SCFD1-218ENST00000556256 CYP4F11Q9HBI6 524 aa5.4□□□□□ -1.54
SCFD1-218ENST00000556256 A0A0A6YYK5 440 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-218ENST00000556256 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.39□□□□□ -1.55
SCFD1-218ENST00000556256 SCAF4O95104 1147 aaKnown RBP5.39□□□□□ -1.55
SCFD1-218ENST00000556256 JUNP05412 331 aaKnown RBP5.39□□□□□ -1.55
SCFD1-218ENST00000556256 PTTG1IPP53801 180 aa5.39□□□□□ -1.55
SCFD1-218ENST00000556256 KRTAP10-9P60411 292 aa5.39□□□□□ -1.55
SCFD1-218ENST00000556256 SLC6A3Q01959 620 aa5.39□□□□□ -1.55
SCFD1-218ENST00000556256 TAP1Q03518 808 aa5.39□□□□□ -1.55
SCFD1-218ENST00000556256 WDR92Q96MX6 357 aa5.39□□□□□ -1.55
SCFD1-218ENST00000556256 NCDNQ9UBB6 729 aa5.39□□□□□ -1.55
SCFD1-218ENST00000556256 PFDN2Q9UHV9 154 aa5.39□□□□□ -1.55
SCFD1-218ENST00000556256 COX11Q9Y6N1 276 aa5.39□□□□□ -1.55
SCFD1-218ENST00000556256 CENPVL1A0A0U1RR11 272 aa5.38□□□□□ -1.55
SCFD1-218ENST00000556256 HIP1RO75146 1068 aa5.38□□□□□ -1.55
SCFD1-218ENST00000556256 STC2O76061 302 aa5.38□□□□□ -1.55
SCFD1-218ENST00000556256 ZBTB48P10074 688 aaPredicted RBP5.38□□□□□ -1.55
SCFD1-218ENST00000556256 GNAT2P19087 354 aa5.38□□□□□ -1.55
SCFD1-218ENST00000556256 HK1P19367 917 aa5.38□□□□□ -1.55
SCFD1-218ENST00000556256 CMTM4Q8IZR5 234 aa5.38□□□□□ -1.55
SCFD1-218ENST00000556256 DYDC2Q96IM9 177 aa5.38□□□□□ -1.55
SCFD1-218ENST00000556256 DHRS4Q9BTZ2 278 aa5.38□□□□□ -1.55
SCFD1-218ENST00000556256 R3HDMLQ9H3Y0 253 aa5.38□□□□□ -1.55
SCFD1-218ENST00000556256 PRDM13Q9H4Q3 707 aa5.38□□□□□ -1.55
SCFD1-218ENST00000556256 ZNF768Q9H5H4 540 aaKnown RBP5.38□□□□□ -1.55
SCFD1-218ENST00000556256 KCMF1Q9P0J7 381 aa5.38□□□□□ -1.55
SCFD1-218ENST00000556256 PDPK1O15530 556 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 RECQL4O94761 1208 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 PRLP01236 227 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 FAM153BP0C7A2 387 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 LAG3P18627 525 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 ZEB1P37275 1124 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-218ENST00000556256 NPEPPSP55786 919 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 IRF9Q00978 393 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 ROM1Q03395 351 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 SSRP1Q08945 709 aaKnown RBP5.37□□□□□ -1.55
SCFD1-218ENST00000556256 SPIDRQ14159 915 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 DCAF17Q5H9S7 520 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-218ENST00000556256 PAPD7Q5XG87 772 aaKnown RBP5.37□□□□□ -1.55
SCFD1-218ENST00000556256 CC2D1AQ6P1N0 951 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-218ENST00000556256 Q6YL49 198 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 APBB1IPQ7Z5R6 666 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-218ENST00000556256 C16orf92Q96LL3 132 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 GMLQ99445 158 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 SLC52A2Q9HAB3 445 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 MSRB2Q9Y3D2 182 aa5.37□□□□□ -1.55
SCFD1-218ENST00000556256 MRPS23Q9Y3D9 190 aaKnown RBP5.37□□□□□ -1.55
SCFD1-218ENST00000556256 AHRRA9YTQ3 701 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 TRIM24O15164 1050 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 DAPK3O43293 454 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 DIAPH1O60610 1272 aaKnown RBP5.36□□□□□ -1.55
SCFD1-218ENST00000556256 LPXNO60711 386 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 ERBB2P04626 1255 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 CDK4P11802 303 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 HNRNPLP14866 589 aaKnown RBP eCLIP5.36□□□□□ -1.55
SCFD1-218ENST00000556256 KIR2DL3P43628 341 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 MTERF2Q49AM1 385 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 RD3Q7Z3Z2 195 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 C2orf69Q8N8R5 385 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 E2F7Q96AV8 911 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 MYEOVQ96EZ4 313 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 MAML3Q96JK9 1138 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 MAGEB10Q96LZ2 347 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-218ENST00000556256 FAM193BQ96PV7 902 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-218ENST00000556256 TRIM55Q9BYV6 548 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 SERHL2Q9H4I8 314 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 NDOR1Q9UHB4 597 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 DNAI1Q9UI46 699 aa5.36□□□□□ -1.55
SCFD1-218ENST00000556256 KCNA6P17658 529 aa5.35□□□□□ -1.55
SCFD1-218ENST00000556256 USP14P54578 494 aa5.35□□□□□ -1.55
SCFD1-218ENST00000556256 FAM189BP81408 668 aa5.35□□□□□ -1.55
SCFD1-218ENST00000556256 SLFN12LQ6IEE8 588 aa5.35□□□□□ -1.55
SCFD1-218ENST00000556256 FBXO42Q6P3S6 717 aa5.35□□□□□ -1.55
SCFD1-218ENST00000556256 BHLHA9Q7RTU4 235 aa5.35□□□□□ -1.55
SCFD1-218ENST00000556256 GSTCDQ8NEC7 633 aa5.35□□□□□ -1.55
SCFD1-218ENST00000556256 SLC7A14Q8TBB6 771 aa5.35□□□□□ -1.55
SCFD1-218ENST00000556256 KCNH6Q9H252 994 aa5.35□□□□□ -1.55
SCFD1-218ENST00000556256 ANKFY1Q9P2R3 1169 aa5.35□□□□□ -1.55
SCFD1-218ENST00000556256 SFMBT1Q9UHJ3 866 aa5.35□□□□□ -1.55
SCFD1-218ENST00000556256 HOXA3O43365 443 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-218ENST00000556256 GYPEP15421 78 aa5.34□□□□□ -1.55
SCFD1-218ENST00000556256 FNTBP49356 437 aa5.34□□□□□ -1.55
SCFD1-218ENST00000556256 RASGRF1Q13972 1273 aa5.34□□□□□ -1.55
SCFD1-218ENST00000556256 FAM214AQ32MH5 1076 aa5.34□□□□□ -1.55
SCFD1-218ENST00000556256 ABHD17CQ6PCB6 329 aa5.34□□□□□ -1.55
SCFD1-218ENST00000556256 LRP10Q7Z4F1 713 aa5.34□□□□□ -1.55
SCFD1-218ENST00000556256 BMP8AQ7Z5Y6 402 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms