RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 CCDC148Q8NFR7 591 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 HELQQ8TDG4 1101 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 NLRP7Q8WX94 980 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 RIPOR3Q96MK2 946 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 RIT2Q99578 217 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 HCFC2Q9Y5Z7 792 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 DCHS1Q96JQ0 3298 aa17.43■□□□□ 0.38
SUPT16H-205ENST00000556217 MTHFRP42898 656 aa17.42■□□□□ 0.38
SUPT16H-205ENST00000556217 KREMEN2Q8NCW0 462 aa17.42■□□□□ 0.38
SUPT16H-205ENST00000556217 TMEM169Q96HH4 297 aa17.42■□□□□ 0.38
SUPT16H-205ENST00000556217 GCOM2Q9BZD3 368 aaPredicted RBP17.42■□□□□ 0.38
SUPT16H-205ENST00000556217 CHST12Q9NRB3 414 aa17.42■□□□□ 0.38
SUPT16H-205ENST00000556217 SORCS3Q9UPU3 1222 aa17.42■□□□□ 0.38
SUPT16H-205ENST00000556217 CACNA1BQ00975 2339 aa17.41■□□□□ 0.38
SUPT16H-205ENST00000556217 ZNF862O60290 1169 aa17.41■□□□□ 0.38
SUPT16H-205ENST00000556217 GAS7O60861 476 aa17.41■□□□□ 0.38
SUPT16H-205ENST00000556217 BCAR1P56945 870 aa17.41■□□□□ 0.38
SUPT16H-205ENST00000556217 ZNF598Q86UK7 904 aaKnown RBP17.41■□□□□ 0.38
SUPT16H-205ENST00000556217 LENG9Q96B70 501 aa17.41■□□□□ 0.38
SUPT16H-205ENST00000556217 CCDC136Q96JN2 1154 aa17.41■□□□□ 0.38
SUPT16H-205ENST00000556217 ZNF668Q96K58 619 aaPredicted RBP17.41■□□□□ 0.38
SUPT16H-205ENST00000556217 TEKT3Q9BXF9 490 aa17.41■□□□□ 0.38
SUPT16H-205ENST00000556217 POMKQ9H5K3 350 aa17.41■□□□□ 0.38
SUPT16H-205ENST00000556217 DZANK1Q9NVP4 752 aa17.41■□□□□ 0.38
SUPT16H-205ENST00000556217 ADAMTS3O15072 1205 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 MSH4O15457 936 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 CHMP2AO43633 222 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 CLASP2O75122 1294 aaKnown RBP17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 CXCL14O95715 111 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 SKIP12755 728 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 SFPQP23246 707 aaKnown RBP eCLIP17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 DNM2P50570 870 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 USP11P51784 963 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 GIT2Q14161 759 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 LRCH2Q5VUJ6 765 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 Q6ZUG5 572 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 BRF1Q92994 677 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 NKD2Q969F2 451 aaPredicted RBP17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 NID2Q14112 1375 aa17.4■□□□□ 0.38
SUPT16H-205ENST00000556217 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 C2CD4DB7Z1M9 353 aa17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 PDGFBP01127 241 aaPredicted RBP17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 FGFR4P22455 802 aa17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 POLGP54098 1239 aaPredicted RBP17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 ATAT1Q5SQI0 421 aa17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 VPS52Q8N1B4 723 aa17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 TDRD5Q8NAT2 981 aaKnown RBP17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 RDM1Q8NG50 284 aa17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 SLC5A5Q92911 643 aa17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 PHKBQ93100 1093 aa17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 TRAIPQ9BWF2 469 aa17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 RNF26Q9BY78 433 aaPredicted RBP17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 INO80BQ9C086 356 aaPredicted RBP17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 DMDP11532 3685 aa17.39■□□□□ 0.37
SUPT16H-205ENST00000556217 NT5C1B-RDH14C9J2C7 533 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 ZC3H11AO75152 810 aaKnown RBP eCLIP17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 CDC45O75419 566 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 PHKA2P46019 1235 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 TARBP2Q15633 366 aaKnown RBP17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 UGCGQ16739 394 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 XKR3Q5GH77 459 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 RARS2Q5T160 578 aaKnown RBP17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 TWF2Q6IBS0 349 aaKnown RBP17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 BLOC1S2Q6QNY1 142 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 GLB1LQ6UWU2 654 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 PLCD3Q8N3E9 789 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 JAKMIP1Q96N16 626 aaKnown RBP17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 NIFKQ9BYG3 293 aaKnown RBP17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 C22orf23Q9BZE7 217 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 UNC45AQ9H3U1 944 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 SH3GLB2Q9NR46 395 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 SEPT9Q9UHD8 586 aaPredicted RBP17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 CDH22Q9UJ99 828 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 IRAK3Q9Y616 596 aa17.38■□□□□ 0.37
SUPT16H-205ENST00000556217 EP300Q09472 2414 aaPredicted RBP17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 CSDE1O75534 798 aaKnown RBP17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 BRD1O95696 1058 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 RAB27AP51159 221 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 RNASELQ05823 741 aaKnown RBP17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 MTERF2Q49AM1 385 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 KIAA1841Q6NSI8 718 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 MIER3Q7Z3K6 550 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 DDX53Q86TM3 631 aaKnown RBP17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 ZNF410Q86VK4 478 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 ZDHHC14Q8IZN3 488 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 ADSSL1Q8N142 457 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 SLC26A6Q9BXS9 759 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 ZBP1Q9H171 429 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 STK39Q9UEW8 545 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 DBR1Q9UK59 544 aaKnown RBP17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 USTQ9Y2C2 406 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 ZNF292O60281 2723 aa17.37■□□□□ 0.37
SUPT16H-205ENST00000556217 CTSAP10619 480 aa17.36■□□□□ 0.37
SUPT16H-205ENST00000556217 CPA1P15085 419 aa17.36■□□□□ 0.37
SUPT16H-205ENST00000556217 NLRP5P59047 1200 aa17.36■□□□□ 0.37
SUPT16H-205ENST00000556217 Q4G0T1 1027 aa17.36■□□□□ 0.37
SUPT16H-205ENST00000556217 NOMO2Q5JPE7 1267 aa17.36■□□□□ 0.37
SUPT16H-205ENST00000556217 FRMD5Q7Z6J6 570 aa17.36■□□□□ 0.37
SUPT16H-205ENST00000556217 PPFIBP1Q86W92 1011 aa17.36■□□□□ 0.37
SUPT16H-205ENST00000556217 FBXL16Q8N461 479 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms