RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 KIAA0895Q8NCT3 520 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 PRPF31Q8WWY3 499 aaKnown RBP13.24□□□□□ -0.29
APEX1-212ENST00000556054 TMEM143Q96AN5 459 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 MAP7D2Q96T17 732 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 TSPY26PQ9H489 355 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 TMEM134Q9H6X4 195 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 MRPL44Q9H9J2 332 aaKnown RBP13.24□□□□□ -0.29
APEX1-212ENST00000556054 SUGCTQ9HAC7 445 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 GPRC5CQ9NQ84 441 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 STARD7Q9NQZ5 370 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 ARHGAP28Q9P2N2 729 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 KIAA0100Q14667 2235 aaKnown RBP13.24□□□□□ -0.29
APEX1-212ENST00000556054 SIP14410 1827 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 SFI1A8K8P3 1242 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 PPP1R3GB7ZBB8 358 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 CAND2O75155 1236 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 TFRCP02786 760 aaKnown RBP13.23□□□□□ -0.29
APEX1-212ENST00000556054 CYP2C9P11712 490 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 COL6A1P12109 1028 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 PRCPP42785 496 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
APEX1-212ENST00000556054 EFNA5P52803 228 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 PEX3P56589 373 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 SNRPFP62306 86 aaKnown RBP13.23□□□□□ -0.29
APEX1-212ENST00000556054 LAMTOR4Q0VGL1 99 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 HIC1Q14526 733 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 PCBP1Q15365 356 aaKnown RBP eCLIP13.23□□□□□ -0.29
APEX1-212ENST00000556054 DPCR1Q3MIW9 517 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 CDCA2Q69YH5 1023 aaPredicted RBP13.23□□□□□ -0.29
APEX1-212ENST00000556054 FAM43BQ6ZT52 329 aaPredicted RBP13.23□□□□□ -0.29
APEX1-212ENST00000556054 MAEAQ7L5Y9 396 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 HAUS6Q7Z4H7 955 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 SERINC5Q86VE9 423 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 ZNF410Q86VK4 478 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 MYOCDQ8IZQ8 938 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 METTL13Q8N6R0 699 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 TMEM161BQ8NDZ6 487 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 TMEM174Q8WUU8 243 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 C2orf40Q9H1Z8 148 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 ZHX3Q9H4I2 956 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 SLC39A2Q9NP94 309 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 KMT5AQ9NQR1 393 aa13.23□□□□□ -0.29
APEX1-212ENST00000556054 CENPFP49454 3210 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 MROH7Q68CQ1 1323 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 PSMA7O14818 248 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 TREHO43280 583 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 MYCNP04198 464 aaPredicted RBP13.22□□□□□ -0.29
APEX1-212ENST00000556054 CLCN3P51790 818 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 PTENP60484 403 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 PTK7Q13308 1070 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 DRP2Q13474 957 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 CAPSQ13938 189 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 CENPPQ6IPU0 288 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 GDF6Q6KF10 455 aaPredicted RBP13.22□□□□□ -0.29
APEX1-212ENST00000556054 RSPH3Q86UC2 560 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 LRRC71Q8N4P6 559 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 ASAP3Q8TDY4 903 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 SCFD1Q8WVM8 642 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 BSNDQ8WZ55 320 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 VTI1AQ96AJ9 217 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 TMEM206Q9H813 350 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 CGNQ9P2M7 1197 aaKnown RBP13.22□□□□□ -0.29
APEX1-212ENST00000556054 GDAQ9Y2T3 454 aa13.22□□□□□ -0.29
APEX1-212ENST00000556054 BICDL2A1A5D9 508 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 IKBKBO14920 756 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 CCNE1P24864 410 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 NMT1P30419 496 aaKnown RBP13.21□□□□□ -0.29
APEX1-212ENST00000556054 SOX10P56693 466 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 RBL2Q08999 1139 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 SNX17Q15036 470 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 NFIL3Q16649 462 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 FAM187BQ17R55 369 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 ANO6Q4KMQ2 910 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 L1TD1Q5T7N2 865 aaKnown RBP13.21□□□□□ -0.29
APEX1-212ENST00000556054 ISM2Q6H9L7 571 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 SRGAP1Q7Z6B7 1085 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 DEPTORQ8TB45 409 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 ENOX1Q8TC92 643 aaKnown RBP13.21□□□□□ -0.29
APEX1-212ENST00000556054 TOX2Q96NM4 488 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 ACCSQ96QU6 501 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 CTAGE1Q96RT6 745 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 POLD4Q9HCU8 107 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 RWDD2AQ9UIY3 292 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 EXOC7Q9UPT5 735 aa13.21□□□□□ -0.29
APEX1-212ENST00000556054 CCDC169A6NNP5 214 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 SMTNL1A8MU46 457 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 K7ENM7 598 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 PDXKO00764 312 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 GCNT3O95395 438 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 PIGRP01833 764 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
APEX1-212ENST00000556054 PHKA2P46019 1235 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 ZNF165P49910 485 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 GPC3P51654 580 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 CASP5P51878 434 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 CHMP4BP1P59074 171 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 LRRC63Q05C16 580 aa13.2□□□□□ -0.3
APEX1-212ENST00000556054 PAK1Q13153 545 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms