RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ZNF536O15090 1300 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 RFXAPO00287 272 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 IKBKBO14920 756 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 VARSP26640 1264 aaKnown RBP7.62□□□□□ -1.19
SLIRP-204ENST00000555890 STAT6P42226 847 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 EIF1AXP47813 144 aaKnown RBP7.62□□□□□ -1.19
SLIRP-204ENST00000555890 SARSP49591 514 aaKnown RBP7.62□□□□□ -1.19
SLIRP-204ENST00000555890 USP11P51784 963 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 IL17AQ16552 155 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 CALCRLQ16602 461 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 DPCR1Q3MIW9 517 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 NT5DC1Q5TFE4 455 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 RRAGBQ5VZM2 374 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 PPP4R3AQ6IN85 833 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 VASH1Q7L8A9 365 aaPredicted RBP7.62□□□□□ -1.19
SLIRP-204ENST00000555890 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.62□□□□□ -1.19
SLIRP-204ENST00000555890 ZSCAN30Q86W11 494 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 DRC7Q8IY82 874 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 SPICE1Q8N0Z3 855 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 AOPEPQ8N6M6 819 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 ANKRD13CQ8N6S4 541 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 KDF1Q8NAX2 398 aaPredicted RBP7.62□□□□□ -1.19
SLIRP-204ENST00000555890 MLKLQ8NB16 471 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 ACER1Q8TDN7 264 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 PAGE5Q96GU1 130 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 GSDMAQ96QA5 445 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 CCSER1Q9C0I3 900 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 TSPAN10Q9H1Z9 355 aaPredicted RBP7.62□□□□□ -1.19
SLIRP-204ENST00000555890 CUEDC2Q9H467 287 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 MAGEF1Q9HAY2 307 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 CACNA2D2Q9NY47 1150 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 STIM2Q9P246 746 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 PARP2Q9UGN5 583 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 AFG3L2Q9Y4W6 797 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 RLFQ13129 1914 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 DOCK1Q14185 1865 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 IGSF10Q6WRI0 2623 aa7.62□□□□□ -1.19
SLIRP-204ENST00000555890 FBN2P35556 2912 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 SPDYE3A6NKU9 549 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 ENO4A6NNW6 628 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 MYL1P05976 194 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 MSNP26038 577 aaKnown RBP7.61□□□□□ -1.19
SLIRP-204ENST00000555890 CCND3P30281 292 aaPredicted RBP7.61□□□□□ -1.19
SLIRP-204ENST00000555890 AFMP43652 599 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 MAPK8P45983 427 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 ZNF75DP51815 510 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 USP14P54578 494 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 SRSF1Q07955 248 aaKnown RBP eCLIP7.61□□□□□ -1.19
SLIRP-204ENST00000555890 CACNB2Q08289 660 aaPredicted RBP7.61□□□□□ -1.19
SLIRP-204ENST00000555890 EHHADHQ08426 723 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 MORC3Q14149 939 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 PDIA5Q14554 519 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 UBE2SQ16763 222 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 FAM83BQ5T0W9 1011 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 RASIP1Q5U651 963 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 ISM2Q6H9L7 571 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 CCDC174Q6PII3 467 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 SARM1Q6SZW1 724 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 MOXD1Q6UVY6 613 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 CABP7Q86V35 215 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 DHX40Q8IX18 779 aaKnown RBP7.61□□□□□ -1.19
SLIRP-204ENST00000555890 LPAR1Q92633 364 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 CCDC47Q96A33 483 aaKnown RBP7.61□□□□□ -1.19
SLIRP-204ENST00000555890 KIFC2Q96AC6 838 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 CALML4Q96GE6 196 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.61□□□□□ -1.196e-7■■■□□ 18.5
SLIRP-204ENST00000555890 GTPBP4Q9BZE4 634 aaKnown RBP7.61□□□□□ -1.19
SLIRP-204ENST00000555890 SAP130Q9H0E3 1048 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 TMEM60Q9H2L4 133 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 EHMT1Q9H9B1 1298 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 AS3MTQ9HBK9 375 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 RMND1Q9NWS8 449 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 LRWD1Q9UFC0 647 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 DDX25Q9UHL0 483 aaKnown RBP7.61□□□□□ -1.19
SLIRP-204ENST00000555890 MAN1B1Q9UKM7 699 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 PNMA2Q9UL42 364 aa7.61□□□□□ -1.19
SLIRP-204ENST00000555890 YBX2Q9Y2T7 364 aaKnown RBP7.61□□□□□ -1.19
SLIRP-204ENST00000555890 MRPL11Q9Y3B7 192 aaKnown RBP7.61□□□□□ -1.19
SLIRP-204ENST00000555890 ABCB11O95342 1321 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 FRMPD3Q5JV73 1810 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 BRWD1Q9NSI6 2320 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 A0A087WWV3 80 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 A0A087X0B3 334 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 A0A1W2PRU2 124 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 LCHNA4D1U4 455 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 SRRM3A6NNA2 597 aaPredicted RBP7.6□□□□□ -1.19
SLIRP-204ENST00000555890 WDR46O15213 610 aaKnown RBP7.6□□□□□ -1.19
SLIRP-204ENST00000555890 SLC26A4O43511 780 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 FZD6O60353 706 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 SORBS3O60504 671 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 S1PR4O95977 384 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 PTPRAP18433 802 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 CDC25BP30305 580 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 TECP42680 631 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 TXKP42681 527 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 SHC2P98077 582 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 ZXDAP98168 799 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 AMPD3Q01432 767 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 MYL5Q02045 173 aa7.6□□□□□ -1.19
SLIRP-204ENST00000555890 ZYXQ15942 572 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms