RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 SLC10A5Q5PT55 438 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 SUSD4Q5VX71 490 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 RTF1Q92541 710 aaKnown RBP6.41□□□□□ -1.38
ATXN3-233ENST00000555816 DPF2Q92785 391 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 DDX11Q96FC9 970 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 PHACTR3Q96KR7 559 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 GORASP1Q9BQQ3 440 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 BCAS3Q9H6U6 928 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 CCSER2Q9H7U1 834 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 CCDC88AQ3V6T2 1871 aa6.41□□□□□ -1.38
ATXN3-233ENST00000555816 C9orf118A6NHY6 69 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 HTATSF1O43719 755 aaKnown RBP6.4□□□□□ -1.38
ATXN3-233ENST00000555816 RAD17O75943 681 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 KCNH1O95259 989 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 C8BP07358 591 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 ADAM17P78536 824 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 PUM1Q14671 1186 aaKnown RBP eCLIP6.4□□□□□ -1.38
ATXN3-233ENST00000555816 TAF7Q15545 349 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-233ENST00000555816 CPZQ66K79 652 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 DPP8Q6V1X1 898 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-233ENST00000555816 KIF6Q6ZMV9 814 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 KRT26Q7Z3Y9 468 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 PPP1R42Q7Z4L9 355 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 TRIM59Q8IWR1 403 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 ZNF34Q8IZ26 560 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 NGEFQ8N5V2 710 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 DPF3Q92784 378 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 DCPSQ96C86 337 aaKnown RBP6.4□□□□□ -1.38
ATXN3-233ENST00000555816 CCDC140Q96MF4 163 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 NKX2-4Q9H2Z4 354 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 CLEC1BQ9P126 229 aa6.4□□□□□ -1.38
ATXN3-233ENST00000555816 TIMM13Q9Y5L4 95 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-233ENST00000555816 ANKRD31Q8N7Z5 1873 aa6.4□□□□□ -1.39
ATXN3-233ENST00000555816 MROH6A6NGR9 719 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 SGSM2O43147 1006 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 IGSF3O75054 1194 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 GPTP24298 496 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 PRKAR2BP31323 418 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 NASPP49321 788 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-233ENST00000555816 RPL11P62913 178 aaKnown RBP6.39□□□□□ -1.39
ATXN3-233ENST00000555816 SCRN1Q12765 414 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 PARP10Q53GL7 1025 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 CC2D1BQ5T0F9 858 aaKnown RBP6.39□□□□□ -1.39
ATXN3-233ENST00000555816 DLK2Q6UY11 383 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 Q8N1Y9 231 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 TINF2Q9BSI4 451 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 GPRC5CQ9NQ84 441 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 MARCH2Q9P0N8 246 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 HDAC9Q9UKV0 1011 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 RRP7AQ9Y3A4 280 aaKnown RBP6.39□□□□□ -1.39
ATXN3-233ENST00000555816 X6R8D5 127 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 MAP3K15Q6ZN16 1313 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 ABCC12Q96J65 1359 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 THSD7BQ9C0I4 1608 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 COL11A2P13942 1736 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-233ENST00000555816 SCN11AQ9UI33 1791 aa6.39□□□□□ -1.39
ATXN3-233ENST00000555816 C22orf46C9J442 243 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 NTSR2O95665 410 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 RPS12P25398 132 aaKnown RBP6.38□□□□□ -1.39
ATXN3-233ENST00000555816 HOXC12P31275 282 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 SMAD4Q13485 552 aaKnown RBP6.38□□□□□ -1.39
ATXN3-233ENST00000555816 TBC1D10BQ4KMP7 808 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-233ENST00000555816 HABP4Q5JVS0 413 aaKnown RBP6.38□□□□□ -1.39
ATXN3-233ENST00000555816 GTF2IRD2BQ6EKJ0 949 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 CD300LDQ6UXZ3 194 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 MCM10Q7L590 875 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 GTF2IRD2Q86UP8 949 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 FAM126BQ8IXS8 530 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 PNISRQ8TF01 805 aaKnown RBP6.38□□□□□ -1.39
ATXN3-233ENST00000555816 MRGPRX3Q96LB0 322 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 UTP14AQ9BVJ6 771 aaKnown RBP6.38□□□□□ -1.39
ATXN3-233ENST00000555816 CAPN10Q9HC96 672 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 APEX2Q9UBZ4 518 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 NUDCQ9Y266 331 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 SIT1Q9Y3P8 196 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 IBTKQ9P2D0 1353 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-233ENST00000555816 COL4A5P29400 1685 aa6.38□□□□□ -1.39
ATXN3-233ENST00000555816 RIC1Q4ADV7 1423 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 ABCC4O15439 1325 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 UBN2Q6ZU65 1347 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 SHTN1A0MZ66 631 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 YDJCA8MPS7 323 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 PSMD14O00487 310 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 MYO1BO43795 1136 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 CYP7B1O75881 506 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 CPP00450 1065 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 THBDP07204 575 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 FKBP1BP68106 108 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 TESK1Q15569 626 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 PRR31Q5SQ13 230 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 DDX46Q7L014 1031 aaKnown RBP6.37□□□□□ -1.39
ATXN3-233ENST00000555816 MILR1Q7Z6M3 343 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 NPLOC4Q8TAT6 608 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 MIS18AQ9NYP9 233 aa6.37□□□□□ -1.39
ATXN3-233ENST00000555816 LTBP1Q14766 1721 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 ADM5C9JUS6 153 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 SCG5P05408 212 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 MYL6BP14649 208 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 NKX3-2P78367 333 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 KCNAB2Q13303 367 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms