RNA–Protein interactions for RNA: ENST00000555430.1

EFCAB11-206, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-206ENST00000555430 TRAF5O00463 557 aa3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 FOXN1O15353 648 aa3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 GTF2F1P35269 517 aaKnown RBP eCLIP3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 RGS3P49796 1198 aa3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 MECP2P51608 486 aaKnown RBP3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 TCIRG1Q13488 830 aa3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 TOB2Q14106 344 aaPredicted RBP3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 ELAVL1Q15717 326 aaKnown RBP3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 PAPD7Q5XG87 772 aaKnown RBP3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 THAP3Q8WTV1 239 aaPredicted RBP3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 TCF25Q9BQ70 676 aa3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 KCMF1Q9P0J7 381 aa3.88□□□□□ -1.79
EFCAB11-206ENST00000555430 TMEM191CA6NGB0 347 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 DVL2O14641 736 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 KRT37O76014 449 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 VSIG10L2P0DP72 767 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 KIF11P52732 1056 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 SMAD3P84022 425 aaKnown RBP3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 RBL2Q08999 1139 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 SLFN12LQ6IEE8 588 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 CLEC14AQ86T13 490 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 RPUSD2Q8IZ73 545 aaKnown RBP3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 PLA2G15Q8NCC3 412 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 MKL1Q969V6 931 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 TTPALQ9BTX7 342 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 GPR87Q9BY21 358 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 NRDE2Q9H7Z3 1164 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 IL23AQ9NPF7 189 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 ACSS2Q9NR19 701 aa3.87□□□□□ -1.79
EFCAB11-206ENST00000555430 UBA6A0AVT1 1052 aaPredicted RBP3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 KLRG2A4D1S0 409 aaPredicted RBP3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 B4E1Z4 1266 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 M0R2C6 588 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 RPS6KA4O75676 772 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 RABGGTBP53611 331 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 COL10A1Q03692 680 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 TTC38Q5R3I4 469 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 FKBP15Q5T1M5 1219 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 MFSD5Q6N075 450 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 HTR3DQ70Z44 454 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 BMP8AQ7Z5Y6 402 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 MRGPREQ86SM8 312 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 DDX53Q86TM3 631 aaKnown RBP3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 DYDC2Q96IM9 177 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 WDR92Q96MX6 357 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 SRPK1Q96SB4 655 aaKnown RBP3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 HAPLN2Q9GZV7 340 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 NCOA5Q9HCD5 579 aaKnown RBP3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 XDHP47989 1333 aa3.86□□□□□ -1.79
EFCAB11-206ENST00000555430 GOLGA6L6A8MZA4 724 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 E9PSI1 815 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 PLD2O14939 933 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 FAM20BO75063 409 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 GLRX3O76003 335 aaKnown RBP3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 TOX4O94842 621 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 CYP17A1P05093 508 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 JUNP05412 331 aaKnown RBP3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 PTGS2P35354 604 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 C2orf27AQ580R0 203 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 RABL3Q5HYI8 236 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 PRAMEF9Q5VWM5 478 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 KRT40Q6A162 431 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 LAIR1Q6GTX8 287 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 ZCCHC8Q6NZY4 707 aaKnown RBP3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 NME9Q86XW9 330 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 ELOA2Q8IYF1 753 aaPredicted RBP3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 CHST14Q8NCH0 376 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 SLC25A43Q8WUT9 341 aaPredicted RBP3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 HAS1Q92839 578 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 LENG9Q96B70 501 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 C16orf92Q96LL3 132 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 MNTQ99583 582 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 KRTAP1-5Q9BYS1 174 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 PCIF1Q9H4Z3 704 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 POLR3BQ9NW08 1133 aaPredicted RBP3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 SAMD15Q9P1V8 674 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 TRPS1Q9UHF7 1281 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 DNAI1Q9UI46 699 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 RCAN3Q9UKA8 241 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 PTCH2Q9Y6C5 1203 aa3.85□□□□□ -1.79
EFCAB11-206ENST00000555430 PTPDC1A2A3K4 754 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 DAPK3O43293 454 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 MFAP3LO75121 409 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 IPO13O94829 963 aaKnown RBP3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 BMP5P22003 454 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 IGFALSP35858 605 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 BCAR1P56945 870 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 MYBPC3Q14896 1274 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 EPHA7Q15375 998 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 C1QL3Q5VWW1 255 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 NAIF1Q69YI7 327 aaPredicted RBP3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 RHOUQ7L0Q8 258 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 KIAA1958Q8N8K9 716 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 MDGA1Q8NFP4 955 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 ATXN2LQ8WWM7 1075 aaKnown RBP3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 RPGRQ92834 1020 aaKnown RBP3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 ARL8AQ96BM9 186 aa3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 ZNF512Q96ME7 567 aaPredicted RBP3.84□□□□□ -1.79
EFCAB11-206ENST00000555430 C8orf37Q96NL8 207 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms