RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 SRGAP2CP0DJJ0 459 aa22.77■■□□□ 1.24
FOXN3-209ENST00000555353 DNAJB2P25686 324 aa22.77■■□□□ 1.24
FOXN3-209ENST00000555353 RABGGTBP53611 331 aa22.77■■□□□ 1.24
FOXN3-209ENST00000555353 MAEAQ7L5Y9 396 aa22.77■■□□□ 1.24
FOXN3-209ENST00000555353 PLIN2Q99541 437 aa22.77■■□□□ 1.24
FOXN3-209ENST00000555353 INO80BQ9C086 356 aaPredicted RBP22.77■■□□□ 1.24
FOXN3-209ENST00000555353 CSRNP2Q9H175 543 aa22.77■■□□□ 1.24
FOXN3-209ENST00000555353 PCDHA7Q9UN72 937 aa22.77■■□□□ 1.24
FOXN3-209ENST00000555353 SZT2Q5T011 3432 aa22.77■■□□□ 1.24
FOXN3-209ENST00000555353 PBX2P40425 430 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 TMCO2Q7Z6W1 182 aaPredicted RBP22.76■■□□□ 1.23
FOXN3-209ENST00000555353 PNMA5Q96PV4 448 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 PCDHA11Q9Y5I1 949 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 TTC3P53804 2025 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 DENND3A2RUS2 1198 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 ENPP3O14638 875 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 CYP11B2P19099 503 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 SFPQP23246 707 aaKnown RBP eCLIP22.76■■□□□ 1.232e-6■□□□□ 10.4
FOXN3-209ENST00000555353 GRB10Q13322 594 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 TFDP1Q14186 410 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 FAM102BQ5T8I3 360 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 ADALQ6DHV7 355 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 FAM117BQ6P1L5 589 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 RNF149Q8NC42 400 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 TIFAQ96CG3 184 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 POLR3FQ9H1D9 316 aaPredicted RBP22.76■■□□□ 1.23
FOXN3-209ENST00000555353 TMX1Q9H3N1 280 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 TCHHQ07283 1943 aa22.76■■□□□ 1.23
FOXN3-209ENST00000555353 TLL1O43897 1013 aa22.75■■□□□ 1.23
FOXN3-209ENST00000555353 CSDE1O75534 798 aaKnown RBP22.75■■□□□ 1.23
FOXN3-209ENST00000555353 GJB5O95377 273 aa22.75■■□□□ 1.23
FOXN3-209ENST00000555353 ARL2P36404 184 aa22.75■■□□□ 1.23
FOXN3-209ENST00000555353 TXLNAP40222 546 aa22.75■■□□□ 1.23
FOXN3-209ENST00000555353 UBE2HP62256 183 aa22.75■■□□□ 1.23
FOXN3-209ENST00000555353 ZNF697Q5TEC3 545 aa22.75■■□□□ 1.23
FOXN3-209ENST00000555353 KCNK18Q7Z418 384 aa22.75■■□□□ 1.23
FOXN3-209ENST00000555353 CLIC6Q96NY7 704 aa22.75■■□□□ 1.23
FOXN3-209ENST00000555353 TSPYL2Q9H2G4 693 aaPredicted RBP22.75■■□□□ 1.23
FOXN3-209ENST00000555353 IFT122Q9HBG6 1241 aa22.75■■□□□ 1.23
FOXN3-209ENST00000555353 GPRC5CQ9NQ84 441 aa22.75■■□□□ 1.23
FOXN3-209ENST00000555353 UPP2O95045 317 aa22.74■■□□□ 1.23
FOXN3-209ENST00000555353 SSBP05455 408 aaKnown RBP eCLIP22.74■■□□□ 1.23
FOXN3-209ENST00000555353 PHKA2P46019 1235 aa22.74■■□□□ 1.23
FOXN3-209ENST00000555353 TMEM119Q4V9L6 283 aa22.74■■□□□ 1.23
FOXN3-209ENST00000555353 SPECC1Q5M775 1068 aa22.74■■□□□ 1.23
FOXN3-209ENST00000555353 ASAP3Q8TDY4 903 aa22.74■■□□□ 1.23
FOXN3-209ENST00000555353 LINC01599Q8WXQ3 324 aa22.74■■□□□ 1.23
FOXN3-209ENST00000555353 TOP1MTQ969P6 601 aa22.74■■□□□ 1.23
FOXN3-209ENST00000555353 ADAM2Q99965 735 aa22.74■■□□□ 1.23
FOXN3-209ENST00000555353 CCSER1Q9C0I3 900 aa22.74■■□□□ 1.23
FOXN3-209ENST00000555353 A0A1W2PQ27 194 aa22.73■■□□□ 1.23
FOXN3-209ENST00000555353 A0A1W2PQ64 194 aa22.73■■□□□ 1.23
FOXN3-209ENST00000555353 A0A1W2PQD8 194 aa22.73■■□□□ 1.23
FOXN3-209ENST00000555353 ZSCAN20P17040 1043 aaPredicted RBP22.73■■□□□ 1.23
FOXN3-209ENST00000555353 FGFR4P22455 802 aa22.73■■□□□ 1.23
FOXN3-209ENST00000555353 KARSQ15046 597 aaKnown RBP22.73■■□□□ 1.23
FOXN3-209ENST00000555353 SRGAP1Q7Z6B7 1085 aa22.73■■□□□ 1.23
FOXN3-209ENST00000555353 SYMPKQ92797 1274 aaKnown RBP22.73■■□□□ 1.23
FOXN3-209ENST00000555353 EPSTI1Q96J88 318 aa22.73■■□□□ 1.23
FOXN3-209ENST00000555353 YBX2Q9Y2T7 364 aaKnown RBP22.73■■□□□ 1.23
FOXN3-209ENST00000555353 MYO9BQ13459 2157 aa22.73■■□□□ 1.23
FOXN3-209ENST00000555353 MYOGP15173 224 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 GLRA2P23416 452 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 CAPSQ13938 189 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 CATSPER4Q7RTX7 472 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 RTN4RL1Q86UN2 441 aaPredicted RBP22.72■■□□□ 1.23
FOXN3-209ENST00000555353 RAD9AQ99638 391 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 NKX2-4Q9H2Z4 354 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 SLC28A3Q9HAS3 691 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 C1orf112Q9NSG2 853 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 LMBRD1Q9NUN5 540 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 CCDC39Q9UFE4 941 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 TMEM265A0A087WTH1 108 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 MGEA5O60502 916 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 PLCG1P19174 1290 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 NFKBIBQ15653 356 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 AXDND1Q5T1B0 1012 aaPredicted RBP22.72■■□□□ 1.23
FOXN3-209ENST00000555353 USP49Q70CQ1 688 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 KIFAP3Q92845 792 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 FAM13BQ9NYF5 915 aa22.72■■□□□ 1.23
FOXN3-209ENST00000555353 LRRIQ4A6NIV6 560 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 PLA2G4BP0C869 781 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 IBSPP21815 317 aaPredicted RBP22.71■■□□□ 1.23
FOXN3-209ENST00000555353 CMA1P23946 247 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 MYH11P35749 1972 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 PTENP60484 403 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 POU5F1BQ06416 359 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 TPRNQ4KMQ1 711 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 RINT1Q6NUQ1 792 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 SLC24A5Q71RS6 500 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 DEFB123Q8N688 67 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 SYT2Q8N9I0 419 aaPredicted RBP22.71■■□□□ 1.23
FOXN3-209ENST00000555353 YME1L1Q96TA2 773 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 RUSC1Q9BVN2 902 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 RGS18Q9NS28 235 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 RNF216Q9NWF9 866 aaPredicted RBP22.71■■□□□ 1.23
FOXN3-209ENST00000555353 INSL6Q9Y581 213 aa22.71■■□□□ 1.23
FOXN3-209ENST00000555353 CA3P07451 260 aa22.7■■□□□ 1.22
FOXN3-209ENST00000555353 STAG3L1P0CL83 205 aa22.7■■□□□ 1.22
FOXN3-209ENST00000555353 PPP2R5AQ15172 486 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms