RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 PJA1Q8NG27 643 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 NXPE3Q969Y0 559 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 KLHL5Q96PQ7 755 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 LZTS2Q9BRK4 669 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 VN1R3Q9BXE9 311 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 EMILIN2Q9BXX0 1053 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 ADAMTS10Q9H324 1103 aa10.96□□□□□ -0.65
SCFD1-215ENST00000555259 WDR6Q9NNW5 1121 aaKnown RBP10.96□□□□□ -0.65
SCFD1-215ENST00000555259 CDV3Q9UKY7 258 aaKnown RBP10.96□□□□□ -0.65
SCFD1-215ENST00000555259 CARNS1A5YM72 827 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 DDAH1O94760 285 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 GALTP07902 379 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 CYP21A2P08686 494 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 ZNF528Q3MIS6 628 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 SWSAP1Q6NVH7 229 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 MIS18BP1Q6P0N0 1132 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 RALYLQ86SE5 291 aaKnown RBP10.95□□□□□ -0.66
SCFD1-215ENST00000555259 CKAP2LQ8IYA6 745 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 ZNF654Q8IZM8 581 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 CMTR1Q8N1G2 835 aaKnown RBP10.95□□□□□ -0.66
SCFD1-215ENST00000555259 IGDCC4Q8TDY8 1250 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
SCFD1-215ENST00000555259 RSPH1Q8WYR4 309 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 STAMQ92783 540 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 BORCS6Q96GS4 357 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 MYADMQ96S97 322 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 FOXQ1Q9C009 403 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 NRDE2Q9H7Z3 1164 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 DACT1Q9NYF0 836 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 AKT3Q9Y243 479 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 TAF6LQ9Y6J9 622 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 ATRXP46100 2492 aa10.95□□□□□ -0.66
SCFD1-215ENST00000555259 hCG_1642624A0A1W2PR95 340 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 DCDC2BA2VCK2 349 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 PRR5-ARHGAP8B1AHC4 643 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 MEIS1O00470 390 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 SPTLC1O15269 473 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 LRRN2O75325 713 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 ADRB1P08588 477 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 FGFR4P22455 802 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 GNAQP50148 359 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 ANTXR2P58335 489 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 ARHGAP8P85298 464 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 LMNB2Q03252 620 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-215ENST00000555259 DCLRE1AQ6PJP8 1040 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 TRMT1LQ7Z2T5 733 aaKnown RBP10.94□□□□□ -0.66
SCFD1-215ENST00000555259 LINC01465Q8N7H1 131 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 NCOA7Q8NI08 942 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 PGBD1Q96JS3 809 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 ZNF668Q96K58 619 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-215ENST00000555259 MAP7D2Q96T17 732 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 RHOBTB2Q9BYZ6 727 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 OSBPL3Q9H4L5 887 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 MAN1C1Q9NR34 630 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 TBC1D13Q9NVG8 400 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 DNAJB4Q9UDY4 337 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 CEP131Q9UPN4 1083 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 MAFBQ9Y5Q3 323 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-215ENST00000555259 U3KPZ7 1027 aaPredicted RBP10.94□□□□□ -0.66
SCFD1-215ENST00000555259 CLUHO75153 1309 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 DOCK8Q8NF50 2099 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 CCDC195A0A1B0GUA6 201 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 E7EWF7 191 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 MAGEB2O15479 319 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 LILRB3O75022 631 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 SSBP05455 408 aaKnown RBP eCLIP10.94□□□□□ -0.66
SCFD1-215ENST00000555259 DARSP14868 501 aaKnown RBP10.94□□□□□ -0.66
SCFD1-215ENST00000555259 TMOD1P28289 359 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 SLC11A1P49279 550 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 GPC3P51654 580 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 EFCAB12Q6NXP0 572 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 CYP26C1Q6V0L0 522 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 PLEKHM2Q8IWE5 1019 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 LRRC71Q8N4P6 559 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 LPPQ93052 612 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 RTKNQ9BST9 563 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 LY9Q9HBG7 655 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 SLC2A4RGQ9NR83 387 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 FBXO4Q9UKT5 387 aa10.94□□□□□ -0.66
SCFD1-215ENST00000555259 DHX15O43143 795 aaKnown RBP10.93□□□□□ -0.66
SCFD1-215ENST00000555259 B4GALT3O60512 393 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 PHKA2P46019 1235 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 STARD6P59095 220 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 RNASELQ05823 741 aaKnown RBP10.93□□□□□ -0.66
SCFD1-215ENST00000555259 LONRF3Q496Y0 759 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 NOMO2Q5JPE7 1267 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 GLB1LQ6UWU2 654 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 HEATR3Q7Z4Q2 680 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 SECISBP2LQ93073 1101 aaKnown RBP10.93□□□□□ -0.66
SCFD1-215ENST00000555259 TRAIPQ9BWF2 469 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 GBP3Q9H0R5 595 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 MRPL17Q9NRX2 175 aaKnown RBP10.93□□□□□ -0.66
SCFD1-215ENST00000555259 STK39Q9UEW8 545 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 SMG5Q9UPR3 1016 aaKnown RBP10.93□□□□□ -0.66
SCFD1-215ENST00000555259 INPP5FQ9Y2H2 1132 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 PCDHGA2Q9Y5H1 932 aa10.93□□□□□ -0.66
SCFD1-215ENST00000555259 MEIS3P2A8K0S8 358 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 ANHXE9PGG2 379 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms