RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 CNBD1Q8NA66 436 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 U2AF1L4Q8WU68 220 aaKnown RBP17.3■□□□□ 0.36
MARK3-209ENST00000555235 DHX36Q9H2U1 1008 aaKnown RBP17.3■□□□□ 0.36
MARK3-209ENST00000555235 SLC24A3Q9HC58 644 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 ABCF3Q9NUQ8 709 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 MTRF1LQ9UGC7 380 aaKnown RBP17.3■□□□□ 0.36
MARK3-209ENST00000555235 TRAF3IP3Q9Y228 551 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 C10orf71Q711Q0 1435 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 DDX3YO15523 660 aaKnown RBP17.3■□□□□ 0.36
MARK3-209ENST00000555235 MED24O75448 989 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 SLC16A2P36021 539 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 GALCP54803 685 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 NCALDP61601 193 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 GRIK3Q13003 919 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 MAPK7Q13164 816 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 PICALMQ13492 652 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 PRPF4BQ13523 1007 aaKnown RBP17.3■□□□□ 0.36
MARK3-209ENST00000555235 SLC29A2Q14542 456 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 JAMLQ86YT9 394 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 IFT74Q96LB3 600 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 UIMC1Q96RL1 719 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 PLCD4Q9BRC7 762 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 MXD3Q9BW11 206 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 CCNL1Q9UK58 526 aaPredicted RBP17.3■□□□□ 0.36
MARK3-209ENST00000555235 AGAP1Q9UPQ3 857 aa17.3■□□□□ 0.36
MARK3-209ENST00000555235 USP15Q9Y4E8 981 aaPredicted RBP17.3■□□□□ 0.36
MARK3-209ENST00000555235 ARFGEF1Q9Y6D6 1849 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 CYP3A7-CYP3A51PA0A087WV96 503 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 UBOX5O94941 541 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 OAS1P00973 400 aaKnown RBP17.29■□□□□ 0.36
MARK3-209ENST00000555235 TMEM253P0C7T8 217 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 RARAP10276 462 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 CYP3A7P24462 503 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 CASP5P51878 434 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 IFI35P80217 286 aaPredicted RBP17.29■□□□□ 0.36
MARK3-209ENST00000555235 EPHA7Q15375 998 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 GPATCH4Q5T3I0 446 aaKnown RBP17.29■□□□□ 0.36
MARK3-209ENST00000555235 ARMC2Q8NEN0 867 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 FBXO25Q8TCJ0 367 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 MBOAT7Q96N66 472 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 METTL14Q9HCE5 456 aaKnown RBP17.29■□□□□ 0.36
MARK3-209ENST00000555235 HOMER3Q9NSC5 361 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 NR2E1Q9Y466 385 aa17.29■□□□□ 0.36
MARK3-209ENST00000555235 RPTORQ8N122 1335 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 LIN7AO14910 233 aaPredicted RBP17.28■□□□□ 0.36
MARK3-209ENST00000555235 KIAA0391O15091 583 aaKnown RBP17.28■□□□□ 0.36
MARK3-209ENST00000555235 SUN1O94901 812 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 KRT18P05783 430 aaKnown RBP17.28■□□□□ 0.36
MARK3-209ENST00000555235 HSPA6P17066 643 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 LMNB1P20700 586 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 STAT3P40763 770 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 TNFAIP8L3Q5GJ75 292 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 DCAF12L1Q5VU92 463 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 NAIF1Q69YI7 327 aaPredicted RBP17.28■□□□□ 0.36
MARK3-209ENST00000555235 ZDHHC24Q6UX98 284 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 SLC35G2Q8TBE7 412 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 RPGRQ92834 1020 aaKnown RBP17.28■□□□□ 0.36
MARK3-209ENST00000555235 SPDL1Q96EA4 605 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 ECT2Q9H8V3 914 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 SMIM23A6NLE4 172 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 O00370 1275 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 CALUO43852 315 aaPredicted RBP17.28■□□□□ 0.36
MARK3-209ENST00000555235 RFC4P35249 363 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 HOXD13P35453 343 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 GCKP35557 465 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 ALDH5A1P51649 535 aaPredicted RBP17.28■□□□□ 0.36
MARK3-209ENST00000555235 KCNJ2P63252 427 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 PPATQ06203 517 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 GIT2Q14161 759 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 PLS1Q14651 629 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 CNGA2Q16280 664 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 GALNTL6Q49A17 601 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 EPM2AIP1Q7L775 607 aaPredicted RBP17.28■□□□□ 0.36
MARK3-209ENST00000555235 CTNNBL1Q8WYA6 563 aaPredicted RBP17.28■□□□□ 0.36
MARK3-209ENST00000555235 DDX4Q9NQI0 724 aaKnown RBP17.28■□□□□ 0.36
MARK3-209ENST00000555235 SNX24Q9Y343 169 aa17.28■□□□□ 0.36
MARK3-209ENST00000555235 GTPBP10A4D1E9 387 aaKnown RBP17.27■□□□□ 0.36
MARK3-209ENST00000555235 USP17L15C9J2P7 530 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 USP17L13C9JLJ4 530 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 USP17L11C9JVI0 530 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 USP17L18D6R9N7 530 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 USP17L22D6RA61 530 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 USP17L17D6RBQ6 530 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 USP17L19D6RCP7 530 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 USP17L20D6RJB6 530 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 PODXLO00592 558 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 STAT1P42224 750 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 COPS2P61201 443 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 ICA1Q05084 483 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 USP17L24Q0WX57 530 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 KCTD19Q17RG1 926 aaPredicted RBP17.27■□□□□ 0.36
MARK3-209ENST00000555235 KNOP1Q1ED39 458 aaKnown RBP17.27■□□□□ 0.36
MARK3-209ENST00000555235 DCAF17Q5H9S7 520 aaPredicted RBP17.27■□□□□ 0.36
MARK3-209ENST00000555235 PRR5LQ6MZQ0 368 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 MFSD5Q6N075 450 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 USP17L6PQ6QN14 398 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 POTEAQ6S8J7 498 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 KCTD1Q719H9 257 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 GLG1Q92896 1179 aa17.27■□□□□ 0.36
MARK3-209ENST00000555235 KLHL29Q96CT2 875 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms