RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 AFPP02771 609 aaKnown RBP9.76□□□□□ -0.85
TDP1-210ENST00000554976 RPL13P26373 211 aaKnown RBP9.76□□□□□ -0.85
TDP1-210ENST00000554976 PON1P27169 355 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 GRB14Q14449 540 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 NEDD9Q14511 834 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 OTUD6AQ7L8S5 288 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 RASAL3Q86YV0 1011 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 GPRC5AQ8NFJ5 357 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 GOLGA5Q8TBA6 731 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 FBXL18Q96ME1 805 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 GPR88Q9GZN0 384 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 ARMCX3Q9UH62 379 aaPredicted RBP9.76□□□□□ -0.85
TDP1-210ENST00000554976 TBX20Q9UMR3 447 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 IGKV6-21A0A0C4DH24 114 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 GOLGA6L9A6NEM1 432 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 ANKRD63C9JTQ0 380 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 NRDCO43847 1150 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 CCDC175P0C221 793 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 TRIM21P19474 475 aaKnown RBP9.76□□□□□ -0.85
TDP1-210ENST00000554976 PSMC2P35998 433 aaKnown RBP9.76□□□□□ -0.85
TDP1-210ENST00000554976 ETF1P62495 437 aaKnown RBP9.76□□□□□ -0.85
TDP1-210ENST00000554976 PPP2R5AQ15172 486 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 KCNV1Q6PIU1 500 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 STXBP4Q6ZWJ1 553 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 EMID1Q96A84 441 aaPredicted RBP9.76□□□□□ -0.85
TDP1-210ENST00000554976 ACCSQ96QU6 501 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 CLEC11AQ9Y240 323 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 PPME1Q9Y570 386 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 STYXL1Q9Y6J8 313 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 RALGAPA2Q2PPJ7 1873 aa9.76□□□□□ -0.85
TDP1-210ENST00000554976 EIF3CLB5ME19 914 aaKnown RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 PMM2O15305 246 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 SLC16A4O15374 487 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 SORBS3O60504 671 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 CELF2O95319 508 aaKnown RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 PIGRP01833 764 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 EDN1P05305 212 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 PLEKP08567 350 aaPredicted RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 GCLCP48506 637 aaPredicted RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 ENPEPQ07075 957 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 MAEAQ7L5Y9 396 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 FBXO16Q8IX29 292 aaPredicted RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 CCDC170Q8IYT3 715 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 CEP170P1Q96L14 293 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 EIF3CQ99613 913 aaKnown RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 NHEJ1Q9H9Q4 299 aaPredicted RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 ATP6V0A4Q9HBG4 840 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 AIPL1Q9NZN9 384 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 GGPS1O95749 300 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 TPM1P09493 284 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 EPB41P11171 864 aaKnown RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 TCF7P36402 384 aaPredicted RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 PEX3P56589 373 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 ARHGAP1Q07960 439 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 MKRN4PQ13434 485 aaPredicted RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 KCTD2Q14681 263 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 EMC2Q15006 297 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 HSDL1Q3SXM5 330 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 CBWD6Q4V339 395 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 CBWD3Q5JTY5 395 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 CBWD5Q5RIA9 395 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 PLPPR4Q7Z2D5 763 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 FAM186BQ8IYM0 893 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 MCPH1Q8NEM0 835 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 ASAP3Q8TDY4 903 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 WDR24Q96S15 920 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 CBWD1Q9BRT8 395 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 LSM14BQ9BX40 385 aaKnown RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 NMRK2Q9NPI5 230 aa9.75□□□□□ -0.85
TDP1-210ENST00000554976 FAM207AQ9NSI2 230 aaPredicted RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 EPN1Q9Y6I3 576 aaPredicted RBP9.75□□□□□ -0.85
TDP1-210ENST00000554976 RCCD1A6NED2 376 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 SNAI1O95863 264 aaPredicted RBP9.74□□□□□ -0.85
TDP1-210ENST00000554976 ADRB2P07550 413 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 XRCC5P13010 732 aaKnown RBP9.74□□□□□ -0.85
TDP1-210ENST00000554976 HOXD8P13378 290 aaPredicted RBP9.74□□□□□ -0.85
TDP1-210ENST00000554976 SLC9A1P19634 815 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 DLG4P78352 724 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 FAM102BQ5T8I3 360 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 KLHDC7AQ5VTJ3 777 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 ARMCX2Q7L311 632 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 ANKRD13CQ8N6S4 541 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 KIFC3Q9BVG8 833 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 CCDC94Q9BW85 323 aaPredicted RBP9.74□□□□□ -0.85
TDP1-210ENST00000554976 HAPLN2Q9GZV7 340 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 CCDC113Q9H0I3 377 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 ZNF408Q9H9D4 720 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 PDGFCQ9NRA1 345 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 TCEAL9Q9UHQ7 104 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 PDCD11Q14690 1871 aaKnown RBP9.74□□□□□ -0.85
TDP1-210ENST00000554976 FAM155AB1AL88 458 aaPredicted RBP9.74□□□□□ -0.85
TDP1-210ENST00000554976 DYNC1I1O14576 645 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 MAFO75444 373 aaPredicted RBP9.74□□□□□ -0.85
TDP1-210ENST00000554976 GLRA2P23416 452 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 ADORA2AP29274 412 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 FMO5P49326 533 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 BFSP1Q12934 665 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 FAM110CQ1W6H9 321 aa9.74□□□□□ -0.85
TDP1-210ENST00000554976 SYT10Q6XYQ8 523 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms