RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 TSG101Q99816 390 aa15.84■□□□□ 0.13
SHOX2-206ENST00000554685 NTPCRQ9BSD7 190 aaKnown RBP15.84■□□□□ 0.13
SHOX2-206ENST00000554685 PRDM10Q9NQV6 1147 aa15.84■□□□□ 0.13
SHOX2-206ENST00000554685 SUCLA2Q9P2R7 463 aaPredicted RBP15.84■□□□□ 0.13
SHOX2-206ENST00000554685 CTNND2Q9UQB3 1225 aa15.84■□□□□ 0.13
SHOX2-206ENST00000554685 MBLAC1A4D2B0 266 aaPredicted RBP15.83■□□□□ 0.12
SHOX2-206ENST00000554685 DNM1LO00429 736 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 CD44P16070 742 aaKnown RBP15.83■□□□□ 0.12
SHOX2-206ENST00000554685 HOXC8P31273 242 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 NPTX2P47972 431 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 LRRC63Q05C16 580 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 TPD52L1Q16890 204 aaPredicted RBP15.83■□□□□ 0.12
SHOX2-206ENST00000554685 UVSSAQ2YD98 709 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 LRRC71Q8N4P6 559 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 AOPEPQ8N6M6 819 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 ZNF507Q8TCN5 953 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 KCNN1Q92952 543 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 P2RX5Q93086 422 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 VTI1AQ96AJ9 217 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 ZNF333Q96JL9 665 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 FIZ1Q96SL8 496 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 C2orf40Q9H1Z8 148 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 TMEM206Q9H813 350 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 POLD4Q9HCU8 107 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 SETD4Q9NVD3 440 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 HDAC6Q9UBN7 1215 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 EXOC7Q9UPT5 735 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 MAPK8IP1Q9UQF2 711 aa15.83■□□□□ 0.12
SHOX2-206ENST00000554685 SMIM35A0A1B0GVV1 85 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 LRRIQ4A6NIV6 560 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 FGFR1OPO95684 399 aaKnown RBP15.82■□□□□ 0.12
SHOX2-206ENST00000554685 MYBP10242 640 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 GLRA2P23416 452 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 NMT1P30419 496 aaKnown RBP15.82■□□□□ 0.12
SHOX2-206ENST00000554685 CLCN3P51790 818 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 EFNA5P52803 228 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 SOX10P56693 466 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 POU5F1BQ06416 359 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 IQCB1Q15051 598 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 MTFR1Q15390 333 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 NBPF20Q3BBV1 942 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 SPATA1Q5VX52 437 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 CENPPQ6IPU0 288 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 TAF2Q6P1X5 1199 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 HAUS6Q7Z4H7 955 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 ZBTB8OSQ8IWT0 167 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 LINC01465Q8N7H1 131 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 RNF214Q8ND24 703 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 GOLGA5Q8TBA6 731 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 ASAP3Q8TDY4 903 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 NOC3LQ8WTT2 800 aaKnown RBP15.82■□□□□ 0.12
SHOX2-206ENST00000554685 SCFD1Q8WVM8 642 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 PRPF31Q8WWY3 499 aaKnown RBP15.82■□□□□ 0.12
SHOX2-206ENST00000554685 DEFB118Q96PH6 123 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 ACCSQ96QU6 501 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 RBSNQ9H1K0 784 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 GTF2IRD1Q9UHL9 959 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 OGDHLQ9ULD0 1010 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 PHF24Q9UPV7 400 aa15.82■□□□□ 0.12
SHOX2-206ENST00000554685 FSD2A1L4K1 749 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 SLC16A4O15374 487 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 CALUO43852 315 aaPredicted RBP15.81■□□□□ 0.12
SHOX2-206ENST00000554685 PPP1R37O75864 691 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 CYP2C9P11712 490 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 SNRPFP62306 86 aaKnown RBP15.81■□□□□ 0.12
SHOX2-206ENST00000554685 ADAM17P78536 824 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 GTF2BQ00403 316 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 LAMTOR4Q0VGL1 99 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 STRN3Q13033 797 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 CAPSQ13938 189 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 KNOP1Q1ED39 458 aaKnown RBP15.81■□□□□ 0.12
SHOX2-206ENST00000554685 FAM47CQ5HY64 1035 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 MARCH8Q5T0T0 291 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 HS2ST1Q7LGA3 356 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 LUZP1Q86V48 1076 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 NME8Q8N427 588 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 TMEM161BQ8NDZ6 487 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 BSNDQ8WZ55 320 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 STRA6Q9BX79 667 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 TMEM134Q9H6X4 195 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 TYW1Q9NV66 732 aaKnown RBP15.81■□□□□ 0.12
SHOX2-206ENST00000554685 CGNQ9P2M7 1197 aaKnown RBP15.81■□□□□ 0.12
SHOX2-206ENST00000554685 ARHGAP28Q9P2N2 729 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 AKT3Q9Y243 479 aa15.81■□□□□ 0.12
SHOX2-206ENST00000554685 A0A0U1RQG5 324 aaPredicted RBP15.8■□□□□ 0.12
SHOX2-206ENST00000554685 A0A1W2PQ45 241 aaPredicted RBP15.8■□□□□ 0.12
SHOX2-206ENST00000554685 A0A1W2PQY0 241 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 DENND3A2RUS2 1198 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 PDXKO00764 312 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 PRPF6O94906 941 aaKnown RBP15.8■□□□□ 0.12
SHOX2-206ENST00000554685 GJB1P08034 283 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 PHKA2P46019 1235 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 MRE11P49959 708 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 CASP5P51878 434 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 ITGA7Q13683 1181 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 EDRF1Q3B7T1 1238 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 CDCA2Q69YH5 1023 aaPredicted RBP15.8■□□□□ 0.12
SHOX2-206ENST00000554685 RSPH3Q86UC2 560 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 ZNF410Q86VK4 478 aa15.8■□□□□ 0.12
SHOX2-206ENST00000554685 RHPN2Q8IUC4 686 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms