RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 SLC24A5Q71RS6 500 aa13.86□□□□□ -0.19
SHMT2-214ENST00000554604 FAM228AQ86W67 206 aa13.86□□□□□ -0.19
SHMT2-214ENST00000554604 LINC01465Q8N7H1 131 aa13.86□□□□□ -0.19
SHMT2-214ENST00000554604 KCNG4Q8TDN1 519 aa13.86□□□□□ -0.19
SHMT2-214ENST00000554604 NLRP7Q8WX94 980 aa13.86□□□□□ -0.19
SHMT2-214ENST00000554604 ZNF668Q96K58 619 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-214ENST00000554604 ASB2Q96Q27 587 aa13.86□□□□□ -0.19
SHMT2-214ENST00000554604 JPH2Q9BR39 696 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-214ENST00000554604 CLSTN2Q9H4D0 955 aa13.86□□□□□ -0.19
SHMT2-214ENST00000554604 C1orf112Q9NSG2 853 aa13.86□□□□□ -0.19
SHMT2-214ENST00000554604 PCDHA12Q9UN75 941 aa13.86□□□□□ -0.19
SHMT2-214ENST00000554604 BDP1A6H8Y1 2624 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 A0A1W2PQ27 194 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 A0A1W2PQ64 194 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 A0A1W2PQD8 194 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 H3BNC9 293 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 MGEA5O60502 916 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 NEMFO60524 1076 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 STBD1O95210 358 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 ZSCAN20P17040 1043 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-214ENST00000554604 ATP2B1P20020 1258 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 BMPR1AP36894 532 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 GPC3P51654 580 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 CDC42EP1Q00587 391 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 EPHA7Q15375 998 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 PAN2Q504Q3 1202 aaKnown RBP13.85□□□□□ -0.19
SHMT2-214ENST00000554604 PLA2G4FQ68DD2 849 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 ANO5Q75V66 913 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 CMTR2Q8IYT2 770 aaKnown RBP13.85□□□□□ -0.19
SHMT2-214ENST00000554604 LINC00301Q8NCQ3 95 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-214ENST00000554604 MRPL38Q96DV4 380 aaKnown RBP13.85□□□□□ -0.19
SHMT2-214ENST00000554604 LXNQ9BS40 222 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 C11orf84Q9BUA3 381 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-214ENST00000554604 ADAMTS10Q9H324 1103 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 RC3H2Q9HBD1 1191 aaKnown RBP13.85□□□□□ -0.19
SHMT2-214ENST00000554604 RGS18Q9NS28 235 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 DACT1Q9NYF0 836 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 COG5Q9UP83 839 aa13.85□□□□□ -0.19
SHMT2-214ENST00000554604 ATG2AQ2TAZ0 1938 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 MAFO75444 373 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-214ENST00000554604 RB1P06400 928 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 CCDC192P0DO97 292 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 CYP4A11Q02928 519 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 TFF2Q03403 129 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 CEBPZQ03701 1054 aaKnown RBP13.84□□□□□ -0.19
SHMT2-214ENST00000554604 STK38Q15208 465 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 TPRNQ4KMQ1 711 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 ADALQ6DHV7 355 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 OTUD6AQ7L8S5 288 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 TPH2Q8IWU9 490 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 EXOC8Q8IYI6 725 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 SLC7A3Q8WY07 619 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 CLP1Q92989 425 aaKnown RBP13.84□□□□□ -0.19
SHMT2-214ENST00000554604 HLA-CQ95604 372 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 CEP170P1Q96L14 293 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 GCOM2Q9BZD3 368 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-214ENST00000554604 TNMDQ9H2S6 317 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 TTC12Q9H892 705 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-214ENST00000554604 CYP26B1Q9NR63 512 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 RGL1Q9NZL6 768 aa13.84□□□□□ -0.19
SHMT2-214ENST00000554604 SUCLA2Q9P2R7 463 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-214ENST00000554604 XIRP2A4UGR9 3374 aa13.83□□□□□ -0.19
SHMT2-214ENST00000554604 C9IYK1 514 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 SPTLC2O15270 562 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 DARSP14868 501 aaKnown RBP13.83□□□□□ -0.2
SHMT2-214ENST00000554604 MCM7P33993 719 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 TXKP42681 527 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 POLGP54098 1239 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-214ENST00000554604 NPEPPSP55786 919 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 SPIRE1Q08AE8 756 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 DRP2Q13474 957 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 TIGD5Q53EQ6 642 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 SPOUT1Q5T280 376 aaKnown RBP13.83□□□□□ -0.2
SHMT2-214ENST00000554604 CCDC73Q6ZRK6 1079 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 RHPN2Q8IUC4 686 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 C4orf19Q8IY42 314 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 CRIPAKQ8N1N5 446 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 DYDC2Q96IM9 177 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 PDLIM2Q96JY6 352 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 CEP89Q96ST8 783 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 PLVAPQ9BX97 442 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 FOXP1Q9H334 677 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-214ENST00000554604 ZSWIM4Q9H7M6 989 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 ATP6V0A4Q9HBG4 840 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 CLIC4Q9Y696 253 aa13.83□□□□□ -0.2
SHMT2-214ENST00000554604 MRPL42Q9Y6G3 142 aaKnown RBP13.83□□□□□ -0.2
SHMT2-214ENST00000554604 IGKV6-21A0A0C4DH24 114 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 C5orf67F2Z3F1 127 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 PPP6R2O75170 966 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 NR1I2O75469 434 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 YWHABP31946 246 aaKnown RBP13.82□□□□□ -0.2
SHMT2-214ENST00000554604 ME1P48163 572 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 GATMP50440 423 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 FAM160A1Q05DH4 1040 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 CTTNQ14247 550 aaKnown RBP13.82□□□□□ -0.2
SHMT2-214ENST00000554604 SLC39A14Q15043 492 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 SF3A1Q15459 793 aaKnown RBP13.82□□□□□ -0.2
SHMT2-214ENST00000554604 XKR9Q5GH70 373 aa13.82□□□□□ -0.2
SHMT2-214ENST00000554604 ZNF410Q86VK4 478 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms