RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 SPTLC3Q9NUV7 552 aa6.44□□□□□ -1.38
MTHFD1-206ENST00000554353 RIC8BQ9NVN3 520 aa6.44□□□□□ -1.38
MTHFD1-206ENST00000554353 APOBEC2Q9Y235 224 aaKnown RBP6.44□□□□□ -1.38
MTHFD1-206ENST00000554353 TELO2Q9Y4R8 837 aa6.44□□□□□ -1.38
MTHFD1-206ENST00000554353 NPC1L1Q9UHC9 1359 aa6.44□□□□□ -1.38
MTHFD1-206ENST00000554353 GPR39O43194 453 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 PAPLNO95428 1278 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 SLC9A1P19634 815 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 MAPKAPK2P49137 400 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 GUCY2FP51841 1108 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 KIF11P52732 1056 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 FZD5Q13467 585 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 SLC9A5Q14940 896 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 TMC6Q7Z403 805 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 ZNF605Q86T29 641 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 FERMT3Q86UX7 667 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 IRF2BP1Q8IU81 584 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 KIAA1958Q8N8K9 716 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 LIN37Q96GY3 246 aaPredicted RBP6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 EMC7Q9NPA0 242 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 TULP4Q9NRJ4 1543 aa6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 EIF3AQ14152 1382 aaKnown RBP6.43□□□□□ -1.38
MTHFD1-206ENST00000554353 PRAMEF25A6NGN4 478 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 FAM90A27PA6NNH2 459 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 ABLIM1O14639 778 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 CREB3O43889 395 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 CLASP2O75122 1294 aaKnown RBP6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 PTPN1P18031 435 aaKnown RBP6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 PPP2R1AP30153 589 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 SEC23AQ15436 765 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 RNF219Q5W0B1 726 aaPredicted RBP6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 CREB3L3Q68CJ9 461 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 IQSEC1Q6DN90 963 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 HDGFL2Q7Z4V5 671 aaPredicted RBP6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 SPATS2Q86XZ4 545 aaKnown RBP6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 PASD1Q8IV76 773 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 TMTC2Q8N394 836 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 COG1Q8WTW3 980 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 ALG3Q92685 438 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 TSPAN17Q96FV3 270 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 TOMM22Q9NS69 142 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 SLC5A4Q9NY91 659 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 RGPD1P0DJD0 1748 aa6.42□□□□□ -1.38
MTHFD1-206ENST00000554353 PHRF1Q9P1Y6 1649 aaKnown RBP6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 ALG1L2C9J202 215 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 DVL2O14641 736 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 BUB1BO60566 1050 aaPredicted RBP6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 VIPR1P32241 457 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 GJA4P35212 333 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 IRAK1P51617 712 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 EPHA5P54756 1037 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 ZNF200P98182 395 aaPredicted RBP6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 ODR4Q5SWX8 454 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 OLFML2BQ68BL8 750 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 MCTP1Q6DN14 999 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 CCDC146Q8IYE0 955 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 EFHBQ8N7U6 833 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 DIRC2Q96SL1 478 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 ELF4Q99607 663 aaPredicted RBP6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 CDK19Q9BWU1 502 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 KCNH7Q9NS40 1196 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 TYW1Q9NV66 732 aaKnown RBP6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 B3GALT1Q9Y5Z6 326 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 QRICH2Q9H0J4 1663 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 ATP7BP35670 1465 aa6.41□□□□□ -1.38
MTHFD1-206ENST00000554353 ZNF503-AS2A6NEH8 195 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 SH3BP5O60239 455 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 KATNA1O75449 491 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 ITGB5P18084 799 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 PMLP29590 882 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 TBX4P57082 545 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 YBX1P67809 324 aaKnown RBP6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 DDB1Q16531 1140 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 LONRF3Q496Y0 759 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 PAN2Q504Q3 1202 aaKnown RBP6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 BRDTQ58F21 947 aaPredicted RBP6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 DLG3Q92796 817 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 PMM1Q92871 262 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 NSUN3Q9H649 340 aaKnown RBP6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 ZNF552Q9H707 407 aaPredicted RBP6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 PRDM11Q9NQV5 511 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 PLA2G2DQ9UNK4 145 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 KNSTRNQ9Y448 316 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 SPO11Q9Y5K1 396 aa6.4□□□□□ -1.38
MTHFD1-206ENST00000554353 SPATA31A5Q5VU36 1347 aa6.4□□□□□ -1.39
MTHFD1-206ENST00000554353 SPATA31A7Q8IWB4 1347 aa6.4□□□□□ -1.39
MTHFD1-206ENST00000554353 KIAA0232Q92628 1395 aa6.4□□□□□ -1.39
MTHFD1-206ENST00000554353 TOPAZ1Q8N9V7 1692 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 THSD7AQ9UPZ6 1657 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 TGM5O43548 720 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 C4BPAP04003 597 aaKnown RBP6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 JUNBP17275 347 aaPredicted RBP6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 PTX3P26022 381 aaPredicted RBP6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 STAT5AP42229 794 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 RRP1P56182 461 aaKnown RBP6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 SRSF3P84103 164 aaKnown RBP6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 ITKQ08881 620 aa6.39□□□□□ -1.39
MTHFD1-206ENST00000554353 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms