RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MTERF2Q49AM1 385 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 FAM26DQ5JW98 314 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 ZNF697Q5TEC3 545 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 HAUS3Q68CZ6 603 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 EFCAB12Q6NXP0 572 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 RUFY4Q6ZNE9 571 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 FAM43BQ6ZT52 329 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-209ENST00000553855 SND1Q7KZF4 910 aaKnown RBP eCLIP9.32□□□□□ -0.922e-8■■■■□ 24.4
PSEN1-209ENST00000553855 BRAPQ7Z569 592 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 TPH2Q8IWU9 490 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 PHOSPHO2Q8TCD6 241 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 SLC7A3Q8WY07 619 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 HAS1Q92839 578 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 CEP170P1Q96L14 293 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 CTAGE1Q96RT6 745 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 SPSB2Q99619 263 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 SUGCTQ9HAC7 445 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 VAV3Q9UKW4 847 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 CDY2AQ9Y6F7 541 aa9.32□□□□□ -0.92
PSEN1-209ENST00000553855 A0A0C4DFX4 3053 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 NBNO60934 754 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 CXCL10P02778 98 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 TECP42680 631 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 POLGP54098 1239 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-209ENST00000553855 CYP4A11Q02928 519 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 KCNC4Q03721 635 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 PAK2Q13177 524 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 MARCH8Q5T0T0 291 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 FOXD4L5Q5VV16 416 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-209ENST00000553855 DTHD1Q6ZMT9 781 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 TSHZ1Q6ZSZ6 1077 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 C16orf59Q7L2K0 433 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 C4orf19Q8IY42 314 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 DEPDC4Q8N2C3 294 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 DBF4BQ8NFT6 615 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 FOXD4L4Q8WXT5 416 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-209ENST00000553855 WNT8BQ93098 351 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 DYDC2Q96IM9 177 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 EIF2AK1Q9BQI3 630 aaKnown RBP9.31□□□□□ -0.92
PSEN1-209ENST00000553855 OCSTAMPQ9BR26 566 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 LXNQ9BS40 222 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 NIFKQ9BYG3 293 aaKnown RBP9.31□□□□□ -0.92
PSEN1-209ENST00000553855 IFIH1Q9BYX4 1025 aaKnown RBP9.31□□□□□ -0.92
PSEN1-209ENST00000553855 CELF4Q9BZC1 486 aaKnown RBP9.31□□□□□ -0.92
PSEN1-209ENST00000553855 PCDHB9Q9Y5E1 797 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 SQORQ9Y6N5 450 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 LTBP2Q14767 1821 aa9.31□□□□□ -0.92
PSEN1-209ENST00000553855 TMEM265A0A087WTH1 108 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 EML1O00423 815 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 GPR182O15218 404 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 GAS2O43903 313 aaKnown RBP9.3□□□□□ -0.92
PSEN1-209ENST00000553855 ZNF862O60290 1169 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 LZTS3O60299 673 aaPredicted RBP9.3□□□□□ -0.92
PSEN1-209ENST00000553855 C22orf31O95567 290 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 GHRP10912 638 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 ATP4AP20648 1035 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 YWHABP31946 246 aaKnown RBP9.3□□□□□ -0.92
PSEN1-209ENST00000553855 CRYBB1P53674 252 aaPredicted RBP9.3□□□□□ -0.92
PSEN1-209ENST00000553855 TMEM62Q0P6H9 643 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 NFX1Q12986 1120 aaKnown RBP9.3□□□□□ -0.92
PSEN1-209ENST00000553855 CTTNQ14247 550 aaKnown RBP9.3□□□□□ -0.92
PSEN1-209ENST00000553855 BECN1Q14457 450 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 UGCGQ16739 394 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 PLEKHG4Q58EX7 1191 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 XKR9Q5GH70 373 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 KRT79Q5XKE5 535 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 B3GNT9Q6UX72 402 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 RNF135Q8IUD6 432 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 TCP11Q8WWU5 503 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 MTMR9Q96QG7 549 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 NACC1Q96RE7 527 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 FTHL17Q9BXU8 183 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 INO80BQ9C086 356 aaPredicted RBP9.3□□□□□ -0.92
PSEN1-209ENST00000553855 SLC28A3Q9HAS3 691 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 TUFT1Q9NNX1 390 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 CYP26B1Q9NR63 512 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 RGL1Q9NZL6 768 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 LRWD1Q9UFC0 647 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 CUL9Q8IWT3 2517 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 DOCK5Q9H7D0 1870 aa9.3□□□□□ -0.92
PSEN1-209ENST00000553855 TLL1O43897 1013 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 RPS6KA5O75582 802 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 CHRNA1P02708 482 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 XRCC6P12956 609 aaKnown RBP eCLIP9.29□□□□□ -0.92
PSEN1-209ENST00000553855 MUTP22033 750 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 CCT6AP40227 531 aaKnown RBP9.29□□□□□ -0.92
PSEN1-209ENST00000553855 PRPHP41219 470 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 CLCN3P51790 818 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 WDR5P61964 334 aaKnown RBP9.29□□□□□ -0.92
PSEN1-209ENST00000553855 NCOA4Q13772 614 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 PDIA5Q14554 519 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 CRTC2Q53ET0 693 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-209ENST00000553855 FBXO47Q5MNV8 452 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 RASIP1Q5U651 963 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 FAM109BQ6ICB4 259 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-209ENST00000553855 TRAF7Q6Q0C0 670 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 KIAA0319LQ8IZA0 1049 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 MYOCDQ8IZQ8 938 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 PHTF2Q8N3S3 785 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 LRRC71Q8N4P6 559 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms