RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 LRRC71Q8N4P6 559 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 METTL13Q8N6R0 699 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 SH3TC2Q8TF17 1288 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 TSG101Q99816 390 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 NTPCRQ9BSD7 190 aaKnown RBP12.96□□□□□ -0.33
NEK9-202ENST00000553823 STRA6Q9BX79 667 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 SEMA6BQ9H3T3 888 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 ST6GALNAC4Q9H4F1 302 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 KMT5AQ9NQR1 393 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 FANCLQ9NW38 375 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 H0YCG3 227 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 SLC16A4O15374 487 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 GLRA2P23416 452 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 TMOD1P28289 359 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 HOXD13P35453 343 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 NAMPTP43490 491 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 GTF2BQ00403 316 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 LRRC63Q05C16 580 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 DRP2Q13474 957 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 MXD4Q14582 209 aaPredicted RBP12.95□□□□□ -0.34
NEK9-202ENST00000553823 KNOP1Q1ED39 458 aaKnown RBP12.95□□□□□ -0.34
NEK9-202ENST00000553823 SLC9C1Q4G0N8 1177 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 ZC2HC1CQ53FD0 456 aaPredicted RBP12.95□□□□□ -0.34
NEK9-202ENST00000553823 ANKRD40Q6AI12 368 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 CCSAPQ6IQ19 270 aaPredicted RBP12.95□□□□□ -0.34
NEK9-202ENST00000553823 MTHFD1LQ6UB35 978 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 CXCL17Q6UXB2 119 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 PCSK9Q8NBP7 692 aaKnown RBP12.95□□□□□ -0.34
NEK9-202ENST00000553823 ASAP3Q8TDY4 903 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 PSPC1Q8WXF1 523 aaKnown RBP12.95□□□□□ -0.34
NEK9-202ENST00000553823 HVCN1Q96D96 273 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 KCTD10Q9H3F6 313 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 SETD4Q9NVD3 440 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 SUCLA2Q9P2R7 463 aaPredicted RBP12.95□□□□□ -0.34
NEK9-202ENST00000553823 CENPFP49454 3210 aa12.95□□□□□ -0.34
NEK9-202ENST00000553823 SCP2P22307 547 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 ABCD1P33897 745 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 KCNA10Q16322 511 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 ZCWPW2Q504Y3 356 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 MARCH8Q5T0T0 291 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 LHX8Q68G74 356 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 CTU1Q7Z7A3 348 aaKnown RBP12.94□□□□□ -0.34
NEK9-202ENST00000553823 CSGALNACT2Q8N6G5 542 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 LINC01465Q8N7H1 131 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 C7orf31Q8N865 590 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 TMEM161BQ8NDZ6 487 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 DEPTORQ8TB45 409 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 NOC3LQ8WTT2 800 aaKnown RBP12.94□□□□□ -0.34
NEK9-202ENST00000553823 LMBR1Q8WVP7 490 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 PRPF31Q8WWY3 499 aaKnown RBP12.94□□□□□ -0.34
NEK9-202ENST00000553823 DUSP9Q99956 384 aaKnown RBP12.94□□□□□ -0.34
NEK9-202ENST00000553823 KIFC3Q9BVG8 833 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.94□□□□□ -0.34
NEK9-202ENST00000553823 HSD3B7Q9H2F3 369 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 SAMSN1Q9NSI8 373 aaKnown RBP12.94□□□□□ -0.34
NEK9-202ENST00000553823 ARHGAP28Q9P2N2 729 aa12.94□□□□□ -0.34
NEK9-202ENST00000553823 ADGRA3Q8IWK6 1321 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 DENND3A2RUS2 1198 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 MBLAC1A4D2B0 266 aaPredicted RBP12.93□□□□□ -0.34
NEK9-202ENST00000553823 LRRIQ4A6NIV6 560 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 PDXKO00764 312 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 ASAP2O43150 1006 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 FGFR1OPO95684 399 aaKnown RBP12.93□□□□□ -0.34
NEK9-202ENST00000553823 ASGR1P07306 291 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 GNAT1P11488 350 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 ZNF18P17022 549 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 CTCFP49711 727 aaPredicted RBP12.93□□□□□ -0.34
NEK9-202ENST00000553823 CLCN3P51790 818 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 KCNA1Q09470 495 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 LAMTOR4Q0VGL1 99 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 TFDP1Q14186 410 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 NFRKBQ6P4R8 1299 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 KSR1Q8IVT5 923 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 SYCP3Q8IZU3 236 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 KCNN1Q92952 543 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 ZBTB10Q96DT7 871 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 ACCSQ96QU6 501 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 SRRTQ9BXP5 876 aaKnown RBP12.93□□□□□ -0.34
NEK9-202ENST00000553823 UNC93B1Q9H1C4 597 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 THAP9Q9H5L6 903 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 TMEM206Q9H813 350 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 TYW1Q9NV66 732 aaKnown RBP12.93□□□□□ -0.34
NEK9-202ENST00000553823 HDAC6Q9UBN7 1215 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 EXOC7Q9UPT5 735 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 TRAF3IP3Q9Y228 551 aa12.93□□□□□ -0.34
NEK9-202ENST00000553823 SIP14410 1827 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 KIAA0100Q14667 2235 aaKnown RBP12.92□□□□□ -0.34
NEK9-202ENST00000553823 C17orf102A2RUQ5 167 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 CALUO43852 315 aaPredicted RBP12.92□□□□□ -0.34
NEK9-202ENST00000553823 CABYRO75952 493 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 HSPA1AP0DMV8 641 aaKnown RBP12.92□□□□□ -0.34
NEK9-202ENST00000553823 HSPA1BP0DMV9 641 aaKnown RBP12.92□□□□□ -0.34
NEK9-202ENST00000553823 CDK11BP21127 795 aaKnown RBP12.92□□□□□ -0.34
NEK9-202ENST00000553823 HOXC8P31273 242 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 LBX1P52954 281 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 ADAM17P78536 824 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 FKBP3Q00688 224 aaKnown RBP12.92□□□□□ -0.34
NEK9-202ENST00000553823 CAPSQ13938 189 aa12.92□□□□□ -0.34
NEK9-202ENST00000553823 EDRF1Q3B7T1 1238 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms