RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 HPSEQ9Y251 543 aa17.88■□□□□ 0.45
ACTN1-209ENST00000553659 SMCO2A6NFE2 343 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 STXBP3O00186 592 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 EYA4O95677 639 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 PFKFB1P16118 471 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 ZNF76P36508 570 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 SREBF1P36956 1147 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 SYKP43405 635 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 SARSP49591 514 aaKnown RBP17.87■□□□□ 0.45
ACTN1-209ENST00000553659 NDUFV1P49821 464 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 NDUFA8P51970 172 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 AP3B2Q13367 1082 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 TMEM266Q2M3C6 531 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 HERC4Q5GLZ8 1057 aaPredicted RBP17.87■□□□□ 0.45
ACTN1-209ENST00000553659 FAM160B1Q5W0V3 765 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 ABHD15Q6UXT9 468 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 NIPA1Q7RTP0 329 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 ADGRD2Q7Z7M1 963 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 RNF135Q8IUD6 432 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 CKAP2LQ8IYA6 745 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 EFHBQ8N7U6 833 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 PYM1Q9BRP8 204 aaKnown RBP17.87■□□□□ 0.45
ACTN1-209ENST00000553659 ERVK-5Q9HDB9 667 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
ACTN1-209ENST00000553659 PCDHB7Q9Y5E2 793 aa17.87■□□□□ 0.45
ACTN1-209ENST00000553659 SRPRBQ9Y5M8 271 aaKnown RBP17.87■□□□□ 0.45
ACTN1-209ENST00000553659 ZNF202O95125 648 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 CCNE2O96020 404 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 CLK2P49760 499 aaKnown RBP17.86■□□□□ 0.45
ACTN1-209ENST00000553659 GATMP50440 423 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 NR5A1Q13285 461 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 ODR4Q5SWX8 454 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 ALYREFQ86V81 257 aaKnown RBP17.86■□□□□ 0.45
ACTN1-209ENST00000553659 KIAA0319LQ8IZA0 1049 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 ATP8B4Q8TF62 1192 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 TNFRSF25Q93038 417 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 CDHR5Q9HBB8 845 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 TMEM260Q9NX78 707 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 BARHL2Q9NY43 387 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 CLEC1BQ9P126 229 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 MUTYHQ9UIF7 546 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 PCDHA4Q9UN74 947 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 COL1A2P08123 1366 aa17.86■□□□□ 0.45
ACTN1-209ENST00000553659 A0A1B0GVL5 298 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 DDX39AO00148 427 aaKnown RBP17.85■□□□□ 0.45
ACTN1-209ENST00000553659 BACH1O14867 736 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 RPS6KA5O75582 802 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 MARCKSP29966 332 aaPredicted RBP17.85■□□□□ 0.45
ACTN1-209ENST00000553659 NRIP1P48552 1158 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 TOB1P50616 345 aaPredicted RBP17.85■□□□□ 0.45
ACTN1-209ENST00000553659 COASYQ13057 564 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 ZNF484Q5JVG2 852 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 ZNF318Q5VUA4 2279 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 KANK3Q6NY19 840 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 HFE2Q6ZVN8 426 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 BLIDQ8IZY5 108 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 ZNF302Q9NR11 478 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 RGS18Q9NS28 235 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 C1orf112Q9NSG2 853 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 CCDC39Q9UFE4 941 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 GINS2Q9Y248 185 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 NOC2LQ9Y3T9 749 aaKnown RBP17.85■□□□□ 0.45
ACTN1-209ENST00000553659 PCDHB12Q9Y5F1 795 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 C5orf42Q9H799 3197 aa17.85■□□□□ 0.45
ACTN1-209ENST00000553659 TECTAO75443 2155 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 FAM86B1E9PN63 330 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 GPR182O15218 404 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 DHX15O43143 795 aaKnown RBP17.84■□□□□ 0.45
ACTN1-209ENST00000553659 MGEA5O60502 916 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 FAM86B2P0C5J1 330 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 GNA11P29992 359 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 UBE3AQ05086 875 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 ANO6Q4KMQ2 910 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 TTC38Q5R3I4 469 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 MIS18BP1Q6P0N0 1132 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 PDXDC2PQ6P474 469 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 SLC24A5Q71RS6 500 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 RBM23Q86U06 439 aaKnown RBP17.84■□□□□ 0.45
ACTN1-209ENST00000553659 PLA2G4DQ86XP0 818 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 CCDC60Q8IWA6 550 aaPredicted RBP17.84■□□□□ 0.45
ACTN1-209ENST00000553659 CEP57L1Q8IYX8 460 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 SMRP1Q8NCR6 262 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 OXER1Q8TDS5 423 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 TMEM40Q8WWA1 233 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 FBXL18Q96ME1 805 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 ADAM2Q99965 735 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 AAASQ9NRG9 546 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 FBXO2Q9UK22 296 aaPredicted RBP17.84■□□□□ 0.45
ACTN1-209ENST00000553659 ST3GAL5Q9UNP4 418 aa17.84■□□□□ 0.45
ACTN1-209ENST00000553659 ESYT2A0FGR8 921 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 DENND3A2RUS2 1198 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 ZBTB42B2RXF5 422 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 C9IYK1 514 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 CYP3A4P08684 503 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 ATP4AP20648 1035 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 IBSPP21815 317 aaPredicted RBP17.83■□□□□ 0.44
ACTN1-209ENST00000553659 ORC2Q13416 577 aaPredicted RBP17.83■□□□□ 0.44
ACTN1-209ENST00000553659 NPY5RQ15761 445 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 SPOUT1Q5T280 376 aaKnown RBP17.83■□□□□ 0.44
ACTN1-209ENST00000553659 SWSAP1Q6NVH7 229 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms