RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 LRRC55Q6ZSA7 311 aa17.77■□□□□ 0.44
CDK4-215ENST00000553237 OTUD6AQ7L8S5 288 aa17.77■□□□□ 0.44
CDK4-215ENST00000553237 ZNF410Q86VK4 478 aa17.77■□□□□ 0.44
CDK4-215ENST00000553237 NEK9Q8TD19 979 aa17.77■□□□□ 0.44
CDK4-215ENST00000553237 TMEM117Q9H0C3 514 aa17.77■□□□□ 0.44
CDK4-215ENST00000553237 DHX33Q9H6R0 707 aaKnown RBP17.77■□□□□ 0.44
CDK4-215ENST00000553237 CWH43Q9H720 699 aa17.77■□□□□ 0.44
CDK4-215ENST00000553237 TTC12Q9H892 705 aaPredicted RBP17.77■□□□□ 0.44
CDK4-215ENST00000553237 PCDHGC5Q9Y5F6 944 aa17.77■□□□□ 0.44
CDK4-215ENST00000553237 A0A0U1RQF3 1178 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 SRGAP2CP0DJJ0 459 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 IL9P15248 144 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 SFPQP23246 707 aaKnown RBP eCLIP17.76■□□□□ 0.43
CDK4-215ENST00000553237 MCM7P33993 719 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 CATSPER4Q7RTX7 472 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 THNSL1Q8IYQ7 743 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 ABI1Q8IZP0 508 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 COLGALT1Q8NBJ5 622 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 MICAL1Q8TDZ2 1067 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 PRPF31Q8WWY3 499 aaKnown RBP17.76■□□□□ 0.43
CDK4-215ENST00000553237 ZSCAN31Q96LW9 406 aaPredicted RBP17.76■□□□□ 0.43
CDK4-215ENST00000553237 MTMR9Q96QG7 549 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 LLPHQ9BRT6 129 aaKnown RBP17.76■□□□□ 0.43
CDK4-215ENST00000553237 INO80BQ9C086 356 aaPredicted RBP17.76■□□□□ 0.43
CDK4-215ENST00000553237 TMEM60Q9H2L4 133 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 DACT1Q9NYF0 836 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 COL4A3BPQ9Y5P4 624 aa17.76■□□□□ 0.43
CDK4-215ENST00000553237 FNDC1Q4ZHG4 1894 aaPredicted RBP17.75■□□□□ 0.43
CDK4-215ENST00000553237 KIAA1671Q9BY89 1806 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 A0A087WWV3 80 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 GRXCR2A6NFK2 248 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 LINC01565O15544 149 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 HOXA2O43364 376 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 NCK2O43639 380 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 FGF18O76093 207 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 LTBRP36941 435 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 RFC5P40937 340 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 DLX2Q07687 328 aaPredicted RBP17.75■□□□□ 0.43
CDK4-215ENST00000553237 COL19A1Q14993 1142 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 CLUL1Q15846 466 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 LONRF3Q496Y0 759 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 CLLU1OSQ5K130 101 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 TWF2Q6IBS0 349 aaKnown RBP17.75■□□□□ 0.43
CDK4-215ENST00000553237 ADGRD2Q7Z7M1 963 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 RBM23Q86U06 439 aaKnown RBP17.75■□□□□ 0.43
CDK4-215ENST00000553237 EXOC8Q8IYI6 725 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 HELQQ8TDG4 1101 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 PSPC1Q8WXF1 523 aaKnown RBP17.75■□□□□ 0.43
CDK4-215ENST00000553237 HSD17B14Q9BPX1 270 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 IFT122Q9HBG6 1241 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 CHST12Q9NRB3 414 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 PIN4Q9Y237 131 aaKnown RBP17.75■□□□□ 0.43
CDK4-215ENST00000553237 PPME1Q9Y570 386 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 BDP1A6H8Y1 2624 aa17.75■□□□□ 0.43
CDK4-215ENST00000553237 ATF7P17544 494 aaPredicted RBP17.74■□□□□ 0.43
CDK4-215ENST00000553237 LAG3P18627 525 aa17.74■□□□□ 0.43
CDK4-215ENST00000553237 PBX3P40426 434 aa17.74■□□□□ 0.43
CDK4-215ENST00000553237 RBM25P49756 843 aaKnown RBP17.74■□□□□ 0.43
CDK4-215ENST00000553237 LAMTOR4Q0VGL1 99 aa17.74■□□□□ 0.43
CDK4-215ENST00000553237 EMC2Q15006 297 aa17.74■□□□□ 0.43
CDK4-215ENST00000553237 ZNF174Q15697 407 aa17.74■□□□□ 0.43
CDK4-215ENST00000553237 CTC1Q2NKJ3 1217 aa17.74■□□□□ 0.43
CDK4-215ENST00000553237 ZNF598Q86UK7 904 aaKnown RBP17.74■□□□□ 0.43
CDK4-215ENST00000553237 FAM184AQ8NB25 1140 aa17.74■□□□□ 0.43
CDK4-215ENST00000553237 LPPQ93052 612 aa17.74■□□□□ 0.43
CDK4-215ENST00000553237 UPF2Q9HAU5 1272 aaKnown RBP17.74■□□□□ 0.43
CDK4-215ENST00000553237 CD320Q9NPF0 282 aa17.74■□□□□ 0.43
CDK4-215ENST00000553237 SH2B1Q9NRF2 756 aaPredicted RBP17.74■□□□□ 0.43
CDK4-215ENST00000553237 MUC3AQ02505 3323 aa17.74■□□□□ 0.43
CDK4-215ENST00000553237 ATG2AQ2TAZ0 1938 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 POTEMA6NI47 508 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 EOMESO95936 686 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 PHKA2P46019 1235 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 ERVFC1P60507 584 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 HMGN5P82970 282 aaKnown RBP17.73■□□□□ 0.43
CDK4-215ENST00000553237 PUS10Q3MIT2 529 aaKnown RBP17.73■□□□□ 0.43
CDK4-215ENST00000553237 KCNT2Q6UVM3 1135 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 LRRC43Q8N309 656 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 FBXO18Q8NFZ0 1043 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 PIGOQ8TEQ8 1089 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 TCP11Q8WWU5 503 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 PPP2R3CQ969Q6 453 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 MTRQ99707 1265 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 MINDY3Q9H8M7 445 aa17.73■□□□□ 0.43
CDK4-215ENST00000553237 PER2O15055 1255 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 NRIP1P48552 1158 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 UBE3AQ05086 875 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 ADAM15Q13444 863 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 GNL2Q13823 731 aaKnown RBP17.72■□□□□ 0.43
CDK4-215ENST00000553237 CSPP1Q1MSJ5 1256 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 FERMT3Q86UX7 667 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 FAM178BQ8IXR5 827 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 RNF149Q8NC42 400 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 ZNF558Q96NG5 402 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 FOXP1Q9H334 677 aaPredicted RBP17.72■□□□□ 0.43
CDK4-215ENST00000553237 XPNPEP1Q9NQW7 623 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 TLR9Q9NR96 1032 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 ANKEF1Q9NU02 776 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 FAM105AQ9NUU6 356 aa17.72■□□□□ 0.43
CDK4-215ENST00000553237 MEIS3P2A8K0S8 358 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms