RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 WDR64B1ANS9 1081 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 PER2O15055 1255 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 PSAPP07602 524 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 KCNA2P16389 499 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 SFNP31947 248 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 ME1P48163 572 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 TOB1P50616 345 aaPredicted RBP12.72□□□□□ -0.37
TMEM116-218ENST00000552839 ATP2C1P98194 919 aaPredicted RBP12.72□□□□□ -0.37
TMEM116-218ENST00000552839 TPRNQ4KMQ1 711 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 FAM160B1Q5W0V3 765 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 HAUS3Q68CZ6 603 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
TMEM116-218ENST00000552839 ETNPPLQ8TBG4 499 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 KCNG4Q8TDN1 519 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 SEPT1Q8WYJ6 367 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 SUSD6Q92537 303 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 SLC5A5Q92911 643 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 LENG9Q96B70 501 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 CDK5RAP3Q96JB5 506 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 SCAND2PQ9GZW5 306 aaPredicted RBP12.72□□□□□ -0.37
TMEM116-218ENST00000552839 TTC12Q9H892 705 aaPredicted RBP12.72□□□□□ -0.37
TMEM116-218ENST00000552839 ERAP1Q9NZ08 941 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 TFIP11Q9UBB9 837 aaKnown RBP12.72□□□□□ -0.37
TMEM116-218ENST00000552839 PCDHA12Q9UN75 941 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 SQORQ9Y6N5 450 aa12.72□□□□□ -0.37
TMEM116-218ENST00000552839 GOLGA6L22H0YM25 854 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 WNT7AO00755 349 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 SPTLC2O15270 562 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 YEATS4O95619 227 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 STAG3L1P0CL83 205 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 ATF7P17544 494 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-218ENST00000552839 MARCKSP29966 332 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-218ENST00000552839 DDIT3P35638 169 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 PRPHP41219 470 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 TECP42680 631 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 IGBP1P78318 339 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 ITGB3BPQ13352 177 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-218ENST00000552839 ZRSR1Q15695 479 aaKnown RBP12.71□□□□□ -0.37
TMEM116-218ENST00000552839 ARL6IP4Q66PJ3 421 aaKnown RBP12.71□□□□□ -0.37
TMEM116-218ENST00000552839 ZNF746Q6NUN9 644 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-218ENST00000552839 CKAP2LQ8IYA6 745 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 VN1R2Q8NFZ6 395 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 ATP8B4Q8TF62 1192 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 GLG1Q92896 1179 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 GJA10Q969M2 543 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 GBP4Q96PP9 640 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 FTHL17Q9BXU8 183 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 FAM49AQ9H0Q0 323 aaPredicted RBP12.71□□□□□ -0.37
TMEM116-218ENST00000552839 TMEM60Q9H2L4 133 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 TLE6Q9H808 572 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 KCNMB3Q9NPA1 279 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 PADI3Q9ULW8 664 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 STK24Q9Y6E0 443 aa12.71□□□□□ -0.37
TMEM116-218ENST00000552839 EVPLQ92817 2033 aa12.71□□□□□ -0.38
TMEM116-218ENST00000552839 DKC1O60832 514 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM116-218ENST00000552839 INSRRP14616 1297 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 NASPP49321 788 aaPredicted RBP12.7□□□□□ -0.38
TMEM116-218ENST00000552839 ACTR2P61160 394 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 TMEM62Q0P6H9 643 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 IER5Q5VY09 327 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 KRT79Q5XKE5 535 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 KRI1Q8N9T8 703 aaKnown RBP12.7□□□□□ -0.38
TMEM116-218ENST00000552839 MICAL1Q8TDZ2 1067 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 ATOH1Q92858 354 aaPredicted RBP12.7□□□□□ -0.38
TMEM116-218ENST00000552839 PCYT2Q99447 389 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 IRF2BPLQ9H1B7 796 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 TMX1Q9H3N1 280 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 UNC45AQ9H3U1 944 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 SMARCAD1Q9H4L7 1026 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 DISC1Q9NRI5 854 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 LRWD1Q9UFC0 647 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 ZDHHC9Q9Y397 364 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 TRPV2Q9Y5S1 764 aa12.7□□□□□ -0.38
TMEM116-218ENST00000552839 IGSF9BQ9UPX0 1349 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 POTEMA6NI47 508 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 RRN3P2A6NIE6 340 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 H0Y858 1186 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 PSMD10O75832 226 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 PDGFBP01127 241 aaPredicted RBP12.69□□□□□ -0.38
TMEM116-218ENST00000552839 RPLP2P05387 115 aaKnown RBP12.69□□□□□ -0.38
TMEM116-218ENST00000552839 ERVFC1P60507 584 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 PPP2R5CQ13362 524 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 SLC39A14Q15043 492 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 PTPN21Q16825 1174 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 DUSP6Q16828 381 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 RDM1Q8NG50 284 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 SNX29Q8TEQ0 813 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 HAS1Q92839 578 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 TNPO1Q92973 898 aaKnown RBP12.69□□□□□ -0.38
TMEM116-218ENST00000552839 S1PR5Q9H228 398 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 ZNF302Q9NR11 478 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 TLR9Q9NR96 1032 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 LRFN2Q9ULH4 789 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 PCDHA10Q9Y5I2 948 aa12.69□□□□□ -0.38
TMEM116-218ENST00000552839 KDM3AQ9Y4C1 1321 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 M0QZ92 97 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 FGF18O76093 207 aa12.68□□□□□ -0.38
TMEM116-218ENST00000552839 IBSPP21815 317 aaPredicted RBP12.68□□□□□ -0.38
TMEM116-218ENST00000552839 LONP1P36776 959 aaKnown RBP12.68□□□□□ -0.38
TMEM116-218ENST00000552839 CCT6AP40227 531 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms