RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 MANSC4A6NHS7 340 aaPredicted RBP10.8□□□□□ -0.68
TMEM116-216ENST00000552800 H0YCG3 227 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 CHMP2AO43633 222 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 GAS2O43903 313 aaKnown RBP10.8□□□□□ -0.68
TMEM116-216ENST00000552800 HIP1RO75146 1068 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 HOXC6P09630 235 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 HOXD8P13378 290 aaPredicted RBP10.8□□□□□ -0.68
TMEM116-216ENST00000552800 ZBED6P86452 979 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 KCNMA1Q12791 1236 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 GRB14Q14449 540 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 PPP2R5AQ15172 486 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 CCL15Q16663 113 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 UGCGQ16739 394 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 CELF3Q5SZQ8 465 aaKnown RBP10.8□□□□□ -0.68
TMEM116-216ENST00000552800 SWSAP1Q6NVH7 229 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 PPFIBP1Q86W92 1011 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 CCDC60Q8IWA6 550 aaPredicted RBP10.8□□□□□ -0.68
TMEM116-216ENST00000552800 PXYLP1Q8TE99 480 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 FBXL18Q96ME1 805 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 UIMC1Q96RL1 719 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 PCYT2Q99447 389 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 KATNBL1Q9H079 304 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 GBP3Q9H0R5 595 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 NUCKS1Q9H1E3 243 aaKnown RBP10.8□□□□□ -0.68
TMEM116-216ENST00000552800 VTA1Q9NP79 307 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 TAB2Q9NYJ8 693 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 MYO6Q9UM54 1294 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 EMSYQ7Z589 1322 aa10.8□□□□□ -0.68
TMEM116-216ENST00000552800 ARID2Q68CP9 1835 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 ZMYM2Q9UBW7 1377 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 PLXNA1Q9UIW2 1896 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 GOLGA6L9A6NEM1 432 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 P4HA2O15460 535 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 CELF2O95319 508 aaKnown RBP10.79□□□□□ -0.68
TMEM116-216ENST00000552800 TPM1P09493 284 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 MYBP10242 640 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 UBA1P22314 1058 aaKnown RBP10.79□□□□□ -0.68
TMEM116-216ENST00000552800 MAPK4P31152 587 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 ARL2P36404 184 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 FXR1P51114 621 aaKnown RBP eCLIP10.79□□□□□ -0.68
TMEM116-216ENST00000552800 POU5F1BQ06416 359 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 ODR4Q5SWX8 454 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 FKBP15Q5T1M5 1219 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 CEP135Q66GS9 1140 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 TAPT1Q6NXT6 567 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.79□□□□□ -0.68
TMEM116-216ENST00000552800 REXO1L1PQ8IX06 675 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 TMEM161BQ8NDZ6 487 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 NLRP7Q8WX94 980 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 PHOX2BQ99453 314 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 PARK7Q99497 189 aaKnown RBP10.79□□□□□ -0.68
TMEM116-216ENST00000552800 R3HDMLQ9H3Y0 253 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 BCAS3Q9H6U6 928 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 CYP26B1Q9NR63 512 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 NRBP2Q9NSY0 501 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 ABHD10Q9NUJ1 306 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 GABBR1Q9UBS5 961 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 LUC7L2Q9Y383 392 aaKnown RBP10.79□□□□□ -0.68
TMEM116-216ENST00000552800 SAMM50Q9Y512 469 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 STYXL1Q9Y6J8 313 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 SRCAPQ6ZRS2 3230 aa10.79□□□□□ -0.68
TMEM116-216ENST00000552800 TTC26A0AVF1 554 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 SLC15A5A6NIM6 579 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 RNF225M0QZC1 329 aaPredicted RBP10.78□□□□□ -0.68
TMEM116-216ENST00000552800 BACH1O14867 736 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 KIAA0391O15091 583 aaKnown RBP10.78□□□□□ -0.68
TMEM116-216ENST00000552800 NKRFO15226 690 aaKnown RBP eCLIP10.78□□□□□ -0.68
TMEM116-216ENST00000552800 AKAP3O75969 853 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 PRPF6O94906 941 aaKnown RBP10.78□□□□□ -0.68
TMEM116-216ENST00000552800 GCNT3O95395 438 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 LCA5LO95447 670 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 PIGRP01833 764 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 NR3C1P04150 777 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 NR2F2P24468 414 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 NMT1P30419 496 aaKnown RBP10.78□□□□□ -0.68
TMEM116-216ENST00000552800 CASP14P31944 242 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 PSMC2P35998 433 aaKnown RBP10.78□□□□□ -0.68
TMEM116-216ENST00000552800 RFC5P40937 340 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 MTIF2P46199 727 aaKnown RBP10.78□□□□□ -0.68
TMEM116-216ENST00000552800 TM4SF4P48230 202 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 SMTNP53814 917 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 BRDTQ58F21 947 aaPredicted RBP10.78□□□□□ -0.68
TMEM116-216ENST00000552800 HSP90AA4PQ58FG1 418 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 XKR9Q5GH70 373 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 WDR59Q6PJI9 974 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 CYFIP1Q7L576 1253 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 HAUS6Q7Z4H7 955 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 SAPCD2Q86UD0 394 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 MAP4K3Q8IVH8 894 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 CCDC170Q8IYT3 715 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 SCFD2Q8WU76 684 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 USP6NLQ92738 828 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 FAM167AQ96KS9 214 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 ACCSQ96QU6 501 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 GPR20Q99678 358 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 PORCNQ9H237 461 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 TMEM134Q9H6X4 195 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 XPNPEP1Q9NQW7 623 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 ZNF302Q9NR11 478 aa10.78□□□□□ -0.68
TMEM116-216ENST00000552800 AGPAT3Q9NRZ7 376 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms