RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 POLD4Q9HCU8 107 aa11.03□□□□□ -0.64
LETMD1-234ENST00000552645 RIOK3O14730 519 aaKnown RBP11.02□□□□□ -0.64
LETMD1-234ENST00000552645 PPP6R2O75170 966 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 DGAT1O75907 488 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.64
LETMD1-234ENST00000552645 EYA4O95677 639 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 SLFN14P0C7P3 912 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 SRGAP2CP0DJJ0 459 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 MUTP22033 750 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 MGAT3Q09327 533 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 RAD51AP2Q09MP3 1159 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 TMEM240Q5SV17 173 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 FAM102BQ5T8I3 360 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 PSRC1Q6PGN9 363 aaPredicted RBP11.02□□□□□ -0.64
LETMD1-234ENST00000552645 C16orf59Q7L2K0 433 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 RPAINQ86UA6 219 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 PDILTQ8N807 584 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 PRPF31Q8WWY3 499 aaKnown RBP11.02□□□□□ -0.64
LETMD1-234ENST00000552645 PSPC1Q8WXF1 523 aaKnown RBP11.02□□□□□ -0.64
LETMD1-234ENST00000552645 TSC1Q92574 1164 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 RNPC3Q96LT9 517 aaKnown RBP11.02□□□□□ -0.64
LETMD1-234ENST00000552645 ZNF830Q96NB3 372 aaPredicted RBP11.02□□□□□ -0.64
LETMD1-234ENST00000552645 IFIH1Q9BYX4 1025 aaKnown RBP11.02□□□□□ -0.64
LETMD1-234ENST00000552645 GPRC5CQ9NQ84 441 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 CALCOCO1Q9P1Z2 691 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 PPME1Q9Y570 386 aa11.02□□□□□ -0.64
LETMD1-234ENST00000552645 MORC2Q9Y6X9 1032 aaPredicted RBP11.02□□□□□ -0.64
LETMD1-234ENST00000552645 MICAL3Q7RTP6 2002 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 IGKV6-21A0A0C4DH24 114 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 SPDYE4A6NLX3 237 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 TULP2O00295 520 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 CUTAO60888 179 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 CSDE1O75534 798 aaKnown RBP11.02□□□□□ -0.65
LETMD1-234ENST00000552645 PFKMP08237 780 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 ACTN1P12814 892 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 IBSPP21815 317 aaPredicted RBP11.02□□□□□ -0.65
LETMD1-234ENST00000552645 NFX1Q12986 1120 aaKnown RBP11.02□□□□□ -0.65
LETMD1-234ENST00000552645 LPIN1Q14693 890 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 GPNMBQ14956 572 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 FAM26DQ5JW98 314 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 FBXO47Q5MNV8 452 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 RRAGBQ5VZM2 374 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 TDHQ8IZJ6 230 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 LINC01465Q8N7H1 131 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 TMEM87AQ8NBN3 555 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 RNF214Q8ND24 703 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 LEO1Q8WVC0 666 aaPredicted RBP11.02□□□□□ -0.65
LETMD1-234ENST00000552645 TCP11Q8WWU5 503 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 SEPT8Q92599 483 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 TIGD1Q96MW7 591 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 CCSER1Q9C0I3 900 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 POLR3FQ9H1D9 316 aaPredicted RBP11.02□□□□□ -0.65
LETMD1-234ENST00000552645 XPNPEP1Q9NQW7 623 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 PCDHA7Q9UN72 937 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 COL4A3BPQ9Y5P4 624 aa11.02□□□□□ -0.65
LETMD1-234ENST00000552645 A0A087WZ62 844 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 GAS2O43903 313 aaKnown RBP11.01□□□□□ -0.65
LETMD1-234ENST00000552645 GPR32O75388 356 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 PLA2G4BP0C869 781 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 CD52P31358 61 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 BMP8BP34820 402 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 STAT6P42226 847 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 GPC3P51654 580 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 CRYBB1P53674 252 aaPredicted RBP11.01□□□□□ -0.65
LETMD1-234ENST00000552645 LAMTOR4Q0VGL1 99 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 PAK2Q13177 524 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 MCM6Q14566 821 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 TMEM119Q4V9L6 283 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 HYIQ5T013 277 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 CNKSR3Q6P9H4 555 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 TSHZ1Q6ZSZ6 1077 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 MCPH1Q8NEM0 835 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 DBF4BQ8NFT6 615 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 TMEM40Q8WWA1 233 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 VWCEQ96DN2 955 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 FDXACB1Q9BRP7 624 aaPredicted RBP11.01□□□□□ -0.65
LETMD1-234ENST00000552645 SCAND2PQ9GZW5 306 aaPredicted RBP11.01□□□□□ -0.65
LETMD1-234ENST00000552645 MTIF3Q9H2K0 278 aaKnown RBP11.01□□□□□ -0.65
LETMD1-234ENST00000552645 AGO3Q9H9G7 860 aaKnown RBP11.01□□□□□ -0.65
LETMD1-234ENST00000552645 USP25Q9UHP3 1055 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 RCOR1Q9UKL0 485 aa11.01□□□□□ -0.65
LETMD1-234ENST00000552645 RPS6KA5O75582 802 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 CXCL10P02778 98 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 KRT18P05783 430 aaKnown RBP11□□□□□ -0.65
LETMD1-234ENST00000552645 CYP11B2P19099 503 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 FGFR4P22455 802 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 NCBP1Q09161 790 aaKnown RBP11□□□□□ -0.65
LETMD1-234ENST00000552645 IKBKEQ14164 716 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 TCTN1Q2MV58 587 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 PLEKHG4Q58EX7 1191 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 SHC4Q6S5L8 630 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 RNF149Q8NC42 400 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 ASAP3Q8TDY4 903 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 RUSC1Q9BVN2 902 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 GCOM2Q9BZD3 368 aaPredicted RBP11□□□□□ -0.65
LETMD1-234ENST00000552645 ADAMTS10Q9H324 1103 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 CXXC1Q9P0U4 656 aaPredicted RBP11□□□□□ -0.65
LETMD1-234ENST00000552645 PADI3Q9ULW8 664 aa11□□□□□ -0.65
LETMD1-234ENST00000552645 NOC2LQ9Y3T9 749 aaKnown RBP11□□□□□ -0.65
LETMD1-234ENST00000552645 GBF1Q92538 1859 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms