RNA–Protein interactions for RNA: ENST00000551964.5

APAF1-210, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene APAF1, Length 5,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-210ENST00000551964 CIITAP33076 1130 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 RSBN1LQ6PCB5 846 aaPredicted RBP20.61■□□□□ 0.89
APAF1-210ENST00000551964 VPS39Q96JC1 886 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 OVOS2A0A0G2JMS6 1433 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 OVOS2A0A0J9YW53 1432 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 OVOS2Q6IE36 1432 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 PNPLA6Q8IY17 1366 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 FRMD3A2A2Y4 597 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 NVLO15381 856 aaKnown RBP20.61■□□□□ 0.89
APAF1-210ENST00000551964 TDP2O95551 362 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 GUCY2CP25092 1073 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 STAT3P40763 770 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 GPSM2P81274 684 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 NFRKBQ6P4R8 1299 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 CHMP6Q96FZ7 201 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 FAM84BQ96KN1 310 aaPredicted RBP20.61■□□□□ 0.89
APAF1-210ENST00000551964 G3BP2Q9UN86 482 aaKnown RBP20.61■□□□□ 0.89
APAF1-210ENST00000551964 ATF5Q9Y2D1 282 aaPredicted RBP20.61■□□□□ 0.89
APAF1-210ENST00000551964 NOC2LQ9Y3T9 749 aaKnown RBP20.61■□□□□ 0.89
APAF1-210ENST00000551964 PAMP19021 973 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 EXOSC10Q01780 885 aaKnown RBP20.61■□□□□ 0.89
APAF1-210ENST00000551964 PDCLQ13371 301 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 TRIM67Q6ZTA4 783 aa20.61■□□□□ 0.89
APAF1-210ENST00000551964 PACSIN2Q9UNF0 486 aaPredicted RBP20.61■□□□□ 0.89
APAF1-210ENST00000551964 CHEK2O96017 543 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.6■□□□□ 0.899e-6■■■■■ 27.7
APAF1-210ENST00000551964 TNS3Q68CZ2 1445 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 GGCXP38435 758 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 MKRN3Q13064 507 aaKnown RBP20.6■□□□□ 0.89
APAF1-210ENST00000551964 MORC4Q8TE76 937 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 ARHGEF1Q92888 912 aaKnown RBP20.6■□□□□ 0.89
APAF1-210ENST00000551964 TULP4Q9NRJ4 1543 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 RASA4BC9J798 803 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 RASA4O43374 803 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 KRT38O76015 456 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 HSPA4LO95757 839 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 MYL3P08590 195 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 SOX5P35711 763 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 TRIM28Q13263 835 aaKnown RBP20.6■□□□□ 0.89
APAF1-210ENST00000551964 ATG9AQ7Z3C6 839 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 LRRC43Q8N309 656 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 NCK2O43639 380 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 MYBL1P10243 752 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 SKIP12755 728 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 TAC1P20366 129 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 PMS2P54278 862 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 PSMC5P62195 406 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 KCNB1Q14721 858 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 TAF11Q15544 211 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 TRIM55Q9BYV6 548 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 MX2P20592 715 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 SCARF1Q14162 830 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 KLHL38Q2WGJ6 581 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 RABL6Q3YEC7 729 aaPredicted RBP20.6■□□□□ 0.89
APAF1-210ENST00000551964 PSPC1Q8WXF1 523 aaKnown RBP20.6■□□□□ 0.89
APAF1-210ENST00000551964 TTC17Q96AE7 1141 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 WRNIP1Q96S55 665 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 LXNQ9BS40 222 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 C2orf40Q9H1Z8 148 aa20.6■□□□□ 0.89
APAF1-210ENST00000551964 USP42Q9H9J4 1324 aaKnown RBP20.59■□□□□ 0.89
APAF1-210ENST00000551964 CHRNA3P32297 505 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 TMPRSS15P98073 1019 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 STOX1Q6ZVD7 989 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 POLD4Q9HCU8 107 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 DONSONQ9NYP3 566 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 GABBR1Q9UBS5 961 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 SPDYE2BA6NHP3 402 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 FOXN1O15353 648 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 CFLARO15519 480 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 SPDYE6P0CI01 402 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 PHEXP78562 749 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 THEM5Q8N1Q8 247 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 SYT2Q8N9I0 419 aaPredicted RBP20.59■□□□□ 0.89
APAF1-210ENST00000551964 EIF2AK1Q9BQI3 630 aaKnown RBP20.59■□□□□ 0.89
APAF1-210ENST00000551964 TRAIPQ9BWF2 469 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 TSPYL2Q9H2G4 693 aaPredicted RBP20.59■□□□□ 0.89
APAF1-210ENST00000551964 KLHL8Q9P2G9 620 aaPredicted RBP20.59■□□□□ 0.89
APAF1-210ENST00000551964 ADAM21Q9UKJ8 722 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 CTIFO43310 598 aaKnown RBP20.59■□□□□ 0.89
APAF1-210ENST00000551964 PPARGP37231 505 aaPredicted RBP20.59■□□□□ 0.89
APAF1-210ENST00000551964 CYP26B1Q9NR63 512 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 USP31Q70CQ4 1352 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 CROCC2H7BZ55 1655 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 GNAT1P11488 350 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 GYS2P54840 703 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 SWSAP1Q6NVH7 229 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 PDLIM2Q96JY6 352 aa20.59■□□□□ 0.89
APAF1-210ENST00000551964 FBXO2Q9UK22 296 aaPredicted RBP20.59■□□□□ 0.89
APAF1-210ENST00000551964 USP27XA6NNY8 438 aa20.58■□□□□ 0.89
APAF1-210ENST00000551964 FTLP02792 175 aaPredicted RBP20.58■□□□□ 0.89
APAF1-210ENST00000551964 PEX19P40855 299 aa20.58■□□□□ 0.89
APAF1-210ENST00000551964 TERF2Q15554 542 aa20.58■□□□□ 0.89
APAF1-210ENST00000551964 FAM8A1Q9UBU6 413 aa20.58■□□□□ 0.89
APAF1-210ENST00000551964 IP6K2Q9UHH9 426 aa20.58■□□□□ 0.89
APAF1-210ENST00000551964 ESRRGP62508 458 aa20.58■□□□□ 0.89
APAF1-210ENST00000551964 PDXDC1Q6P996 788 aa20.58■□□□□ 0.89
APAF1-210ENST00000551964 WDR75Q8IWA0 830 aaKnown RBP20.58■□□□□ 0.89
APAF1-210ENST00000551964 PARD3BQ8TEW8 1205 aa20.58■□□□□ 0.89
APAF1-210ENST00000551964 POLR3FQ9H1D9 316 aaPredicted RBP20.58■□□□□ 0.89
APAF1-210ENST00000551964 HDLBPQ00341 1268 aaKnown RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms