RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 CLSTN1O94985 981 aa14.15□□□□□ -0.14
CACNB3-219ENST00000551544 FKBP1AP62942 108 aaKnown RBP14.15□□□□□ -0.14
CACNB3-219ENST00000551544 MYL7Q01449 175 aa14.15□□□□□ -0.14
CACNB3-219ENST00000551544 UAP1Q16222 522 aaPredicted RBP14.15□□□□□ -0.14
CACNB3-219ENST00000551544 TUBB8Q3ZCM7 444 aa14.15□□□□□ -0.14
CACNB3-219ENST00000551544 CC2D2BQ6DHV5 1058 aa14.15□□□□□ -0.14
CACNB3-219ENST00000551544 STXBP4Q6ZWJ1 553 aa14.15□□□□□ -0.14
CACNB3-219ENST00000551544 MICALL1Q8N3F8 863 aa14.15□□□□□ -0.14
CACNB3-219ENST00000551544 RASGEF1CQ8N431 466 aa14.15□□□□□ -0.14
CACNB3-219ENST00000551544 CCDC26Q8TAB7 109 aa14.15□□□□□ -0.14
CACNB3-219ENST00000551544 LRRC45Q96CN5 670 aa14.15□□□□□ -0.14
CACNB3-219ENST00000551544 MKNK1Q9BUB5 465 aa14.15□□□□□ -0.14
CACNB3-219ENST00000551544 TAS2R14Q9NYV8 317 aa14.15□□□□□ -0.14
CACNB3-219ENST00000551544 BCCIPQ9P287 314 aaKnown RBP eCLIP14.15□□□□□ -0.14
CACNB3-219ENST00000551544 HMGB1P1B2RPK0 211 aaPredicted RBP14.14□□□□□ -0.15
CACNB3-219ENST00000551544 ERLIN2O94905 339 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 MYZAPP0CAP1 466 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 TNFAIP3P21580 790 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 LIG3P49916 1009 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 NPEPPSP55786 919 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 PALB2Q86YC2 1186 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.14□□□□□ -0.15
CACNB3-219ENST00000551544 RFFLQ8WZ73 363 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 ARHGEF26Q96DR7 871 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 LXNQ9BS40 222 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 GPR88Q9GZN0 384 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 TMBIM4Q9HC24 238 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 NR2E1Q9Y466 385 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 ARHGEF35A5YM69 484 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 COPB2P35606 906 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 KCTD17Q8N5Z5 321 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 CEP89Q96ST8 783 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 THAP2Q9H0W7 228 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 PCIF1Q9H4Z3 704 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 SEL1LQ9UBV2 794 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 APEX2Q9UBZ4 518 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 ATRNL1Q5VV63 1379 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 ATXN2Q99700 1313 aaKnown RBP14.14□□□□□ -0.15
CACNB3-219ENST00000551544 HIP1RO75146 1068 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 TMEM253P0C7T8 217 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 SEC24CP53992 1094 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 ITGB3BPQ13352 177 aaPredicted RBP14.14□□□□□ -0.15
CACNB3-219ENST00000551544 ZNF211Q13398 564 aaPredicted RBP14.14□□□□□ -0.15
CACNB3-219ENST00000551544 NFIL3Q16649 462 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 PHLDB3Q6NSJ2 640 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 TRIM51Q9BSJ1 452 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 SLITRK6Q9H5Y7 841 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 GOPCQ9HD26 462 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 DMAC2Q9NW81 257 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 KIF13BQ9NQT8 1826 aa14.14□□□□□ -0.15
CACNB3-219ENST00000551544 H0YIN7 160 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 FOXN3O00409 490 aaPredicted RBP14.13□□□□□ -0.15
CACNB3-219ENST00000551544 CHRNA5P30532 468 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 ZNF131P52739 623 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 EIF1ADQ8N9N8 165 aaKnown RBP14.13□□□□□ -0.15
CACNB3-219ENST00000551544 UTP11Q9Y3A2 253 aaKnown RBP14.13□□□□□ -0.15
CACNB3-219ENST00000551544 ATP8B3O60423 1300 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 COL11A2P13942 1736 aaPredicted RBP14.13□□□□□ -0.15
CACNB3-219ENST00000551544 TISP43B9A030 160 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 H0YGN5 161 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 K7ENM7 598 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 IPO5O00410 1097 aaKnown RBP14.13□□□□□ -0.15
CACNB3-219ENST00000551544 PPP1R37O75864 691 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 MDH1P40925 334 aaKnown RBP14.13□□□□□ -0.15
CACNB3-219ENST00000551544 ZNF844Q08AG5 666 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 BFSP1Q12934 665 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 TRAF1Q13077 416 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 DCAF12L1Q5VU92 463 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 LRIG3Q6UXM1 1119 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 TRMT1LQ7Z2T5 733 aaKnown RBP14.13□□□□□ -0.15
CACNB3-219ENST00000551544 TEKT3Q9BXF9 490 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 WDR11Q9BZH6 1224 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 EPN3Q9H201 632 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.13□□□□□ -0.15
CACNB3-219ENST00000551544 FBXO28Q9NVF7 368 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 ODF2LQ9ULJ1 636 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 TMX2Q9Y320 296 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 NFS1Q9Y697 457 aa14.13□□□□□ -0.15
CACNB3-219ENST00000551544 NCANO14594 1321 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 VIL1P09327 827 aaKnown RBP14.12□□□□□ -0.15
CACNB3-219ENST00000551544 CCDC172P0C7W6 258 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 DLG4P78352 724 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 PPP2R5AQ15172 486 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 SLC20A1Q8WUM9 679 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 NCAPGQ9BPX3 1015 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 EHMT1Q9H9B1 1298 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 TMOD2Q9NZR1 351 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 MRPL11Q9Y3B7 192 aaKnown RBP14.12□□□□□ -0.15
CACNB3-219ENST00000551544 DDX3YO15523 660 aaKnown RBP14.12□□□□□ -0.15
CACNB3-219ENST00000551544 KRT13P13646 458 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 PPATQ06203 517 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 DHX9Q08211 1270 aaKnown RBP14.12□□□□□ -0.15
CACNB3-219ENST00000551544 PTGISQ16647 500 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 ODF2Q5BJF6 829 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 DAW1Q8N136 415 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 CHURC1Q8WUH1 139 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 SYT11Q9BT88 431 aa14.12□□□□□ -0.15
CACNB3-219ENST00000551544 UBE2TQ9NPD8 197 aaPredicted RBP14.12□□□□□ -0.15
CACNB3-219ENST00000551544 HERC5Q9UII4 1024 aaKnown RBP14.12□□□□□ -0.15
CACNB3-219ENST00000551544 COG5Q9UP83 839 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms