RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 FOXC1Q12948 553 aa15.52■□□□□ 0.08
SNRPF-203ENST00000551316 PSAPL1Q6NUJ1 521 aa15.52■□□□□ 0.08
SNRPF-203ENST00000551316 MTHFD1LQ6UB35 978 aa15.52■□□□□ 0.08
SNRPF-203ENST00000551316 ECHDC2Q86YB7 292 aa15.52■□□□□ 0.08
SNRPF-203ENST00000551316 CMASQ8NFW8 434 aaPredicted RBP15.52■□□□□ 0.08
SNRPF-203ENST00000551316 MTMR8Q96EF0 704 aa15.52■□□□□ 0.08
SNRPF-203ENST00000551316 MYL10Q9BUA6 226 aa15.52■□□□□ 0.08
SNRPF-203ENST00000551316 RBM25P49756 843 aaKnown RBP15.51■□□□□ 0.07
SNRPF-203ENST00000551316 KIZQ2M2Z5 673 aa15.51■□□□□ 0.07
SNRPF-203ENST00000551316 DDX53Q86TM3 631 aaKnown RBP15.51■□□□□ 0.07
SNRPF-203ENST00000551316 ZNF598Q86UK7 904 aaKnown RBP15.51■□□□□ 0.07
SNRPF-203ENST00000551316 DDX1Q92499 740 aaKnown RBP15.51■□□□□ 0.07
SNRPF-203ENST00000551316 IGSF21Q96ID5 467 aa15.51■□□□□ 0.07
SNRPF-203ENST00000551316 SENP7Q9BQF6 1050 aa15.51■□□□□ 0.07
SNRPF-203ENST00000551316 DNAJB4Q9UDY4 337 aa15.51■□□□□ 0.07
SNRPF-203ENST00000551316 CFAP46Q8IYW2 2715 aa15.51■□□□□ 0.07
SNRPF-203ENST00000551316 RRN3P2A6NIE6 340 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 GCOM1H8Y6P7 765 aaPredicted RBP15.5■□□□□ 0.07
SNRPF-203ENST00000551316 HRO43593 1189 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 LILRB3O75022 631 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 POLR2MP0CAP2 368 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 KLRC2P26717 231 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 LIMK1P53667 647 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 SLC44A4Q53GD3 710 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 ASPRV1Q53RT3 343 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 KIAA0319LQ8IZA0 1049 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 ABI1Q8IZP0 508 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 TMEM87AQ8NBN3 555 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 SEPT1Q8WYJ6 367 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 SMG7Q92540 1137 aaKnown RBP15.5■□□□□ 0.07
SNRPF-203ENST00000551316 NXPE3Q969Y0 559 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 TTC14Q96N46 770 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 SMOC1Q9H4F8 434 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 RAB23Q9ULC3 237 aa15.5■□□□□ 0.07
SNRPF-203ENST00000551316 PDCD11Q14690 1871 aaKnown RBP15.5■□□□□ 0.07
SNRPF-203ENST00000551316 MEIS3P2A8K0S8 358 aa15.49■□□□□ 0.07
SNRPF-203ENST00000551316 POLGP54098 1239 aaPredicted RBP15.49■□□□□ 0.07
SNRPF-203ENST00000551316 AASDHQ4L235 1098 aaPredicted RBP15.49■□□□□ 0.07
SNRPF-203ENST00000551316 TPRG1Q6ZUI0 275 aa15.49■□□□□ 0.07
SNRPF-203ENST00000551316 ZNF687Q8N1G0 1237 aa15.49■□□□□ 0.07
SNRPF-203ENST00000551316 SHDQ96IW2 340 aa15.49■□□□□ 0.07
SNRPF-203ENST00000551316 OSBPL6Q9BZF3 934 aa15.49■□□□□ 0.07
SNRPF-203ENST00000551316 SMARCAD1Q9H4L7 1026 aa15.49■□□□□ 0.07
SNRPF-203ENST00000551316 FAM217BQ9NTX9 383 aaPredicted RBP15.49■□□□□ 0.07
SNRPF-203ENST00000551316 F5P12259 2224 aa15.48■□□□□ 0.07
SNRPF-203ENST00000551316 RPLP2P05387 115 aaKnown RBP15.48■□□□□ 0.07
SNRPF-203ENST00000551316 SPATA31D3P0C874 917 aa15.48■□□□□ 0.07
SNRPF-203ENST00000551316 SLC11A1P49279 550 aa15.48■□□□□ 0.07
SNRPF-203ENST00000551316 PRKCQQ04759 706 aa15.48■□□□□ 0.07
SNRPF-203ENST00000551316 SPATA31D4Q6ZUB0 917 aa15.48■□□□□ 0.07
SNRPF-203ENST00000551316 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.48■□□□□ 0.07
SNRPF-203ENST00000551316 PPFIBP1Q86W92 1011 aa15.48■□□□□ 0.07
SNRPF-203ENST00000551316 HOMER1Q86YM7 354 aa15.48■□□□□ 0.07
SNRPF-203ENST00000551316 MIER1Q8N108 512 aa15.48■□□□□ 0.07
SNRPF-203ENST00000551316 LRRCC1Q9C099 1032 aa15.48■□□□□ 0.07
SNRPF-203ENST00000551316 NRDE2Q9H7Z3 1164 aa15.48■□□□□ 0.07
SNRPF-203ENST00000551316 MAP3K20Q9NYL2 800 aaKnown RBP15.48■□□□□ 0.07
SNRPF-203ENST00000551316 HECTD1Q9ULT8 2610 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 TRIM6-TRIM34B2RNG4 842 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 ZBTB42B2RXF5 422 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 ZBTB5O15062 677 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 GPR182O15218 404 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 HOXA2O43364 376 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 GPR32O75388 356 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 FGAP02671 866 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 VTNP04004 478 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 ITGB5P18084 799 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 ALDH7A1P49419 539 aaKnown RBP15.47■□□□□ 0.07
SNRPF-203ENST00000551316 NTHL1P78549 312 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 SIM2Q14190 667 aaPredicted RBP15.47■□□□□ 0.07
SNRPF-203ENST00000551316 LONRF3Q496Y0 759 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 ZBTB41Q5SVQ8 909 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 STPG1Q5TH74 334 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 CELF5Q8N6W0 485 aaKnown RBP15.47■□□□□ 0.07
SNRPF-203ENST00000551316 ADAM32Q8TC27 787 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 STAMQ92783 540 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 LPPQ93052 612 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 ZNF668Q96K58 619 aaPredicted RBP15.47■□□□□ 0.07
SNRPF-203ENST00000551316 KXD1Q9BQD3 176 aa15.47■□□□□ 0.07
SNRPF-203ENST00000551316 C2CD2LO14523 706 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 STAM2O75886 525 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 GALTP07902 379 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 PARP1P09874 1014 aaKnown RBP15.46■□□□□ 0.07
SNRPF-203ENST00000551316 FGFR4P22455 802 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 KLRC1P26715 233 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 MAGEA9P43362 315 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 RPS9P46781 194 aaKnown RBP15.46■□□□□ 0.07
SNRPF-203ENST00000551316 SATB1Q01826 763 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 ZNF252P-AS1Q0IIN9 211 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 GIT2Q14161 759 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 PCNX4Q63HM2 1172 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 C19orf48Q6RUI8 117 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 FAM160A2Q8N612 972 aaPredicted RBP15.46■□□□□ 0.07
SNRPF-203ENST00000551316 ENAHQ8N8S7 591 aaPredicted RBP15.46■□□□□ 0.07
SNRPF-203ENST00000551316 PI4K2BQ8TCG2 481 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 OTUD7AQ8TE49 926 aaPredicted RBP15.46■□□□□ 0.07
SNRPF-203ENST00000551316 PIGSQ96S52 555 aa15.46■□□□□ 0.07
SNRPF-203ENST00000551316 LSM14BQ9BX40 385 aaKnown RBP15.46■□□□□ 0.07
SNRPF-203ENST00000551316 FAM126AQ9BYI3 521 aaPredicted RBP15.46■□□□□ 0.07
SNRPF-203ENST00000551316 TMEM8BA6NDV4 472 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms