RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 GOLGA5Q8TBA6 731 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 LMBR1Q8WVP7 490 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 MBOAT7Q96N66 472 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 NOX5Q96PH1 765 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 PNMA5Q96PV4 448 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 CHP1Q99653 195 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 WDR11Q9BZH6 1224 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 TTYH3Q9C0H2 523 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 SEMA6BQ9H3T3 888 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 ZHX3Q9H4I2 956 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 GINM1Q9NU53 330 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 AGPAT5Q9NUQ2 364 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 MAP3K20Q9NYL2 800 aaKnown RBP4.78□□□□□ -1.64
CCDC59-204ENST00000550589 SEL1LQ9UBV2 794 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 TCEAL9Q9UHQ7 104 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 PUF60Q9UHX1 559 aaKnown RBP4.78□□□□□ -1.64
CCDC59-204ENST00000550589 COL2A1P02458 1487 aaPredicted RBP4.78□□□□□ -1.64
CCDC59-204ENST00000550589 TNRC6CQ9HCJ0 1690 aaKnown RBP4.78□□□□□ -1.64
CCDC59-204ENST00000550589 TAF1P21675 1872 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 A0A1W2PNR3 127 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 C2CD2LO14523 706 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 MEIS2O14770 477 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 ADAMTS3O15072 1205 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 LCA5LO95447 670 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 ZSCAN20P17040 1043 aaPredicted RBP4.78□□□□□ -1.64
CCDC59-204ENST00000550589 MAGEA1P43355 309 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 EHHADHQ08426 723 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 TNFAIP1Q13829 316 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 KNOP1Q1ED39 458 aaKnown RBP4.78□□□□□ -1.64
CCDC59-204ENST00000550589 LONRF2Q1L5Z9 754 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 MIIPQ5JXC2 388 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 ZNF385CQ66K41 422 aaPredicted RBP4.78□□□□□ -1.64
CCDC59-204ENST00000550589 USP17L6PQ6QN14 398 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 RRAGAQ7L523 313 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 HS2ST1Q7LGA3 356 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 TRAPPC11Q7Z392 1133 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 MCF2L2Q86YR7 1114 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 MSANTD4Q8NCY6 345 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 SLC17A8Q8NDX2 589 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 NEK9Q8TD19 979 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 FAM151AQ8WW52 585 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 HAS1Q92839 578 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 VTI1AQ96AJ9 217 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 SPAG5Q96R06 1193 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 NACC1Q96RE7 527 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 POLR3CQ9BUI4 534 aaPredicted RBP4.78□□□□□ -1.64
CCDC59-204ENST00000550589 ZCCHC2Q9C0B9 1178 aaKnown RBP4.78□□□□□ -1.64
CCDC59-204ENST00000550589 TUFT1Q9NNX1 390 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 MED4Q9NPJ6 270 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 FAM207AQ9NSI2 230 aaPredicted RBP4.78□□□□□ -1.64
CCDC59-204ENST00000550589 STK32BQ9NY57 414 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 FAM53CQ9NYF3 392 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 ZDHHC3Q9NYG2 299 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 ARMCX3Q9UH62 379 aaPredicted RBP4.78□□□□□ -1.64
CCDC59-204ENST00000550589 RAB21Q9UL25 225 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 TRAF3IP3Q9Y228 551 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 PCDHA13Q9Y5I0 950 aa4.78□□□□□ -1.64
CCDC59-204ENST00000550589 FRMD3A2A2Y4 597 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 DDTLA6NHG4 134 aaPredicted RBP4.77□□□□□ -1.65
CCDC59-204ENST00000550589 A6NNZ2 444 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 EIF3DO15371 548 aaKnown RBP eCLIP4.77□□□□□ -1.65
CCDC59-204ENST00000550589 SLC16A3O15427 465 aaKnown RBP4.77□□□□□ -1.65
CCDC59-204ENST00000550589 FLOT1O75955 427 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 FAM13AO94988 1023 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 EYA4O95677 639 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 NDUFB10O96000 172 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 GH2P01242 217 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 ASNSP08243 561 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 CYP11B2P19099 503 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 NR2F2P24468 414 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 RXRBP28702 533 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 ARHGAP25P42331 645 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 KIF11P52732 1056 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 HIRAP54198 1017 aaPredicted RBP4.77□□□□□ -1.65
CCDC59-204ENST00000550589 ALCAMQ13740 583 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 SMC1AQ14683 1233 aaKnown RBP4.77□□□□□ -1.65
CCDC59-204ENST00000550589 LBRQ14739 615 aaKnown RBP4.77□□□□□ -1.65
CCDC59-204ENST00000550589 TERF2Q15554 542 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 TUBB8Q3ZCM7 444 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 USH1GQ495M9 461 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 CFAP221Q4G0U5 840 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 GLE1Q53GS7 698 aaKnown RBP4.77□□□□□ -1.65
CCDC59-204ENST00000550589 NCAPH2Q6IBW4 605 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 WDR59Q6PJI9 974 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 CATSPER3Q86XQ3 398 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 TTLL6Q8N841 843 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 AGBL3Q8NEM8 1001 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 C1orf216Q8TAB5 229 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 DNAJC19Q96DA6 116 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 IWS1Q96ST2 819 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 C2orf49Q9BVC5 232 aaPredicted RBP4.77□□□□□ -1.65
CCDC59-204ENST00000550589 TDRD3Q9H7E2 651 aaKnown RBP4.77□□□□□ -1.65
CCDC59-204ENST00000550589 ZSWIM4Q9H7M6 989 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 VIPAS39Q9H9C1 493 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 OLFML3Q9NRN5 406 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 TYW1Q9NV66 732 aaKnown RBP4.77□□□□□ -1.65
CCDC59-204ENST00000550589 FEM1BQ9UK73 627 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 FBXL5Q9UKA1 691 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 FRMD4BQ9Y2L6 1034 aa4.77□□□□□ -1.65
CCDC59-204ENST00000550589 TMX2Q9Y320 296 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms