RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 LMAN2LQ9H0V9 348 aa17.85■□□□□ 0.45
COX6A1-203ENST00000550009 TRIP11Q15643 1979 aa17.84■□□□□ 0.45
COX6A1-203ENST00000550009 FGF18O76093 207 aa17.84■□□□□ 0.45
COX6A1-203ENST00000550009 XBP1P17861 261 aa17.84■□□□□ 0.45
COX6A1-203ENST00000550009 ATP2B1P20020 1258 aa17.84■□□□□ 0.45
COX6A1-203ENST00000550009 NRIP1P48552 1158 aa17.84■□□□□ 0.45
COX6A1-203ENST00000550009 VN1R2Q8NFZ6 395 aa17.84■□□□□ 0.45
COX6A1-203ENST00000550009 CEP170P1Q96L14 293 aa17.84■□□□□ 0.45
COX6A1-203ENST00000550009 IFT122Q9HBG6 1241 aa17.84■□□□□ 0.45
COX6A1-203ENST00000550009 C11orf16Q9NQ32 467 aa17.84■□□□□ 0.45
COX6A1-203ENST00000550009 NT5C1B-RDH14C9J2C7 533 aa17.83■□□□□ 0.44
COX6A1-203ENST00000550009 B4GALT3O60512 393 aa17.83■□□□□ 0.44
COX6A1-203ENST00000550009 P4HBP07237 508 aaKnown RBP17.83■□□□□ 0.44
COX6A1-203ENST00000550009 GCFC2P16383 781 aaKnown RBP17.83■□□□□ 0.44
COX6A1-203ENST00000550009 AFF1P51825 1210 aaKnown RBP17.83■□□□□ 0.44
COX6A1-203ENST00000550009 ADAM15Q13444 863 aa17.83■□□□□ 0.44
COX6A1-203ENST00000550009 EPHA7Q15375 998 aa17.83■□□□□ 0.44
COX6A1-203ENST00000550009 ELAC1Q9H777 363 aaKnown RBP17.83■□□□□ 0.44
COX6A1-203ENST00000550009 XPNPEP1Q9NQW7 623 aa17.83■□□□□ 0.44
COX6A1-203ENST00000550009 CLEC1BQ9P126 229 aa17.83■□□□□ 0.44
COX6A1-203ENST00000550009 BARX2Q9UMQ3 279 aaPredicted RBP17.83■□□□□ 0.44
COX6A1-203ENST00000550009 POTEMA6NI47 508 aa17.82■□□□□ 0.44
COX6A1-203ENST00000550009 SLITRK3O94933 977 aa17.82■□□□□ 0.44
COX6A1-203ENST00000550009 SRGAP2CP0DJJ0 459 aa17.82■□□□□ 0.44
COX6A1-203ENST00000550009 ZSCAN20P17040 1043 aaPredicted RBP17.82■□□□□ 0.44
COX6A1-203ENST00000550009 COL9A1P20849 921 aa17.82■□□□□ 0.44
COX6A1-203ENST00000550009 ODR4Q5SWX8 454 aa17.82■□□□□ 0.44
COX6A1-203ENST00000550009 TMEM173Q86WV6 379 aaPredicted RBP17.82■□□□□ 0.44
COX6A1-203ENST00000550009 TPH2Q8IWU9 490 aa17.82■□□□□ 0.44
COX6A1-203ENST00000550009 PRPF31Q8WWY3 499 aaKnown RBP17.82■□□□□ 0.44
COX6A1-203ENST00000550009 WASF1Q92558 559 aa17.82■□□□□ 0.44
COX6A1-203ENST00000550009 EIF2AK1Q9BQI3 630 aaKnown RBP17.82■□□□□ 0.44
COX6A1-203ENST00000550009 GCOM2Q9BZD3 368 aaPredicted RBP17.82■□□□□ 0.44
COX6A1-203ENST00000550009 TMEM117Q9H0C3 514 aa17.82■□□□□ 0.44
COX6A1-203ENST00000550009 DHX33Q9H6R0 707 aaKnown RBP17.82■□□□□ 0.44
COX6A1-203ENST00000550009 MYO10Q9HD67 2058 aa17.82■□□□□ 0.44
COX6A1-203ENST00000550009 A0A0U1RQF3 1178 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 TBX3O15119 743 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 MBTPS2O43462 519 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 MARCH6O60337 910 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 YWHABP31946 246 aaKnown RBP17.81■□□□□ 0.44
COX6A1-203ENST00000550009 TXKP42681 527 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 PHKA2P46019 1235 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 NBR1Q14596 966 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 CALCRLQ16602 461 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 XKR9Q5GH70 373 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 PLPP4Q5VZY2 271 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 C4orf19Q8IY42 314 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 THNSL1Q8IYQ7 743 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 FEZF2Q8TBJ5 459 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 MSLNLQ96KJ4 702 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 MTMR9Q96QG7 549 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 CDH22Q9UJ99 828 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 PIN4Q9Y237 131 aaKnown RBP17.81■□□□□ 0.44
COX6A1-203ENST00000550009 PCDHB12Q9Y5F1 795 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 COL4A3BPQ9Y5P4 624 aa17.81■□□□□ 0.44
COX6A1-203ENST00000550009 HIDE1A8MVS5 230 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 FSCN2O14926 492 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 MCM7P33993 719 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 POLGP54098 1239 aaPredicted RBP17.8■□□□□ 0.44
COX6A1-203ENST00000550009 ZP2Q05996 745 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 LAMTOR4Q0VGL1 99 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 EMC2Q15006 297 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 NAALADL2Q58DX5 795 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 KCNT2Q6UVM3 1135 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 GJD3Q8N144 294 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 PIGOQ8TEQ8 1089 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 BCL7CQ8WUZ0 217 aaPredicted RBP17.8■□□□□ 0.44
COX6A1-203ENST00000550009 TTC12Q9H892 705 aaPredicted RBP17.8■□□□□ 0.44
COX6A1-203ENST00000550009 TLR9Q9NR96 1032 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 LIMCH1Q9UPQ0 1083 aa17.8■□□□□ 0.44
COX6A1-203ENST00000550009 HOXA11P31270 313 aaPredicted RBP17.79■□□□□ 0.44
COX6A1-203ENST00000550009 SSTR3P32745 418 aaPredicted RBP17.79■□□□□ 0.44
COX6A1-203ENST00000550009 DNM2P50570 870 aa17.79■□□□□ 0.44
COX6A1-203ENST00000550009 UBXN11Q5T124 520 aa17.79■□□□□ 0.44
COX6A1-203ENST00000550009 TWF2Q6IBS0 349 aaKnown RBP17.79■□□□□ 0.44
COX6A1-203ENST00000550009 CATSPER4Q7RTX7 472 aa17.79■□□□□ 0.44
COX6A1-203ENST00000550009 ASAP3Q8TDY4 903 aa17.79■□□□□ 0.44
COX6A1-203ENST00000550009 MICAL1Q8TDZ2 1067 aa17.79■□□□□ 0.44
COX6A1-203ENST00000550009 HSD17B14Q9BPX1 270 aa17.79■□□□□ 0.44
COX6A1-203ENST00000550009 APOL5Q9BWW9 433 aa17.79■□□□□ 0.44
COX6A1-203ENST00000550009 PLXNA3P51805 1871 aa17.79■□□□□ 0.44
COX6A1-203ENST00000550009 C2orf16Q68DN1 1984 aa17.79■□□□□ 0.44
COX6A1-203ENST00000550009 NEMFO60524 1076 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 CD2BP2O95400 341 aaKnown RBP17.78■□□□□ 0.44
COX6A1-203ENST00000550009 CENPBP07199 599 aaPredicted RBP17.78■□□□□ 0.44
COX6A1-203ENST00000550009 LAG3P18627 525 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 NDUFV1P49821 464 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 ZNF174Q15697 407 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 ZNF410Q86VK4 478 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 SLFN12Q8IYM2 578 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 EFHBQ8N7U6 833 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 AUTS2Q8WXX7 1259 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 CPB2Q96IY4 423 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 LRFN3Q9BTN0 628 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 ZSWIM4Q9H7M6 989 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 TLE6Q9H808 572 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 BRMS1Q9HCU9 246 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 FAM105AQ9NUU6 356 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 DNAJB4Q9UDY4 337 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms