RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 MAP2K2P36507 400 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 OXCT1P55809 520 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 C1QTNF8P60827 252 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 KLRC3Q07444 240 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 Q6ZUG5 572 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 STOX1Q6ZVD7 989 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 FAM160B2Q86V87 743 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 PLD6Q8N2A8 252 aaKnown RBP7.55□□□□□ -1.2
COX6A1-202ENST00000549525 INTS4Q96HW7 963 aaKnown RBP7.55□□□□□ -1.2
COX6A1-202ENST00000549525 WNK4Q96J92 1243 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 C12orf42Q96LP6 360 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 MIPEPQ99797 713 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 TMEM47Q9BQJ4 181 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 AGXT2Q9BYV1 514 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 UPF3BQ9BZI7 483 aaKnown RBP7.55□□□□□ -1.2
COX6A1-202ENST00000549525 LY9Q9HBG7 655 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 INCENPQ9NQS7 918 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 IL17RBQ9NRM6 502 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 UBP1Q9NZI7 540 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 FEM1BQ9UK73 627 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 ADAM30Q9UKF2 790 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 NAP1L2Q9ULW6 460 aaPredicted RBP7.55□□□□□ -1.2
COX6A1-202ENST00000549525 LIMCH1Q9UPQ0 1083 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 KIF3AQ9Y496 699 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 CTDP1Q9Y5B0 961 aaPredicted RBP7.55□□□□□ -1.2
COX6A1-202ENST00000549525 PCDHGB7Q9Y5F8 929 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 LAMB1P07942 1786 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 TRPM7Q96QT4 1865 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 DDX60LQ5H9U9 1706 aaKnown RBP7.55□□□□□ -1.2
COX6A1-202ENST00000549525 LAMA4Q16363 1823 aa7.55□□□□□ -1.2
COX6A1-202ENST00000549525 A0A0G2JLL6 359 aaPredicted RBP7.54□□□□□ -1.2
COX6A1-202ENST00000549525 SH2B2O14492 632 aaPredicted RBP7.54□□□□□ -1.2
COX6A1-202ENST00000549525 SCAMP3O14828 347 aaKnown RBP7.54□□□□□ -1.2
COX6A1-202ENST00000549525 DNAJA2O60884 412 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 PRNPP04156 253 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 HSPA6P17066 643 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 METAP2P50579 478 aaKnown RBP eCLIP7.54□□□□□ -1.2
COX6A1-202ENST00000549525 EVCP57679 992 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 RACK1P63244 317 aaKnown RBP7.54□□□□□ -1.2
COX6A1-202ENST00000549525 AKAP17AQ02040 695 aaKnown RBP7.54□□□□□ -1.2
COX6A1-202ENST00000549525 IKQ13123 557 aaPredicted RBP7.54□□□□□ -1.2
COX6A1-202ENST00000549525 SEC23AQ15436 765 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 SLFN13Q68D06 897 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 DLK2Q6UY11 383 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 CLEC17AQ6ZS10 378 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 MOB2Q70IA6 237 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 CYB5R4Q7L1T6 521 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 CHST3Q7LGC8 479 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 PRRT2Q7Z6L0 340 aaPredicted RBP7.54□□□□□ -1.2
COX6A1-202ENST00000549525 MCATQ8IVS2 390 aaKnown RBP7.54□□□□□ -1.2
COX6A1-202ENST00000549525 ZNF654Q8IZM8 581 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 MFSD2AQ8NA29 543 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 PRPF38AQ8NAV1 312 aaKnown RBP7.54□□□□□ -1.2
COX6A1-202ENST00000549525 FANCBQ8NB91 859 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 BRF1Q92994 677 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 RNF34Q969K3 372 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 CLMNQ96JQ2 1002 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 SLKQ9H2G2 1235 aaPredicted RBP7.54□□□□□ -1.2
COX6A1-202ENST00000549525 PLAGL2Q9UPG8 496 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 SSC5DA1L4H1 1573 aa7.54□□□□□ -1.2
COX6A1-202ENST00000549525 MYPNQ86TC9 1320 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 MYH8P13535 1937 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 CCL15-CCL14A0A0B4J2E2 113 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 KLF18A0A0U1RQI7 1052 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 SMIM22K7EJ46 135 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 NMT2O60551 498 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 HTR3BO95264 441 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 XBP1P17861 261 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 PLCG1P19174 1290 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 HOXA7P31268 230 aaPredicted RBP7.53□□□□□ -1.2
COX6A1-202ENST00000549525 GUCY1A2P33402 732 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 STAT2P52630 851 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 HMGCS2P54868 508 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 ANTXR2P58335 489 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 IRX3P78415 501 aaPredicted RBP7.53□□□□□ -1.2
COX6A1-202ENST00000549525 COG2Q14746 738 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 CCL15Q16663 113 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 CCDC96Q2M329 555 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 TMEM201Q5SNT2 666 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 SLC6A19Q695T7 634 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 APOA5Q6Q788 366 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 GADL1Q6ZQY3 521 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 ANKRD23Q86SG2 305 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 MB21D1Q8N884 522 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 NUP133Q8WUM0 1156 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 EAF1Q96JC9 268 aaPredicted RBP7.53□□□□□ -1.2
COX6A1-202ENST00000549525 KIF2CQ99661 725 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 TANGO6Q9C0B7 1094 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 BRMS1Q9HCU9 246 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 REV1Q9UBZ9 1251 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 CCDC39Q9UFE4 941 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 AGTPBP1Q9UPW5 1226 aa7.53□□□□□ -1.2
COX6A1-202ENST00000549525 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.53□□□□□ -1.2
COX6A1-202ENST00000549525 GOLGA8AA7E2F4 631 aa7.52□□□□□ -1.21
COX6A1-202ENST00000549525 GOLGA8BA8MQT2 603 aa7.52□□□□□ -1.21
COX6A1-202ENST00000549525 UPK3BL1B0FP48 263 aa7.52□□□□□ -1.21
COX6A1-202ENST00000549525 KLRF2D3W0D1 207 aa7.52□□□□□ -1.21
COX6A1-202ENST00000549525 UPK3BL2E5RIL1 263 aa7.52□□□□□ -1.21
COX6A1-202ENST00000549525 CA12O43570 354 aa7.52□□□□□ -1.21
COX6A1-202ENST00000549525 ZBED4O75132 1171 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms