RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 VAV3Q9UKW4 847 aa17.64■□□□□ 0.41
CHMP1A-206ENST00000549139 PADI3Q9ULW8 664 aa17.64■□□□□ 0.41
CHMP1A-206ENST00000549139 NOL7Q9UMY1 257 aaKnown RBP17.64■□□□□ 0.41
CHMP1A-206ENST00000549139 FNDC1Q4ZHG4 1894 aaPredicted RBP17.64■□□□□ 0.41
CHMP1A-206ENST00000549139 IGSF9BQ9UPX0 1349 aa17.64■□□□□ 0.41
CHMP1A-206ENST00000549139 PROB1E7EW31 1015 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 PER2O15055 1255 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 NEMFO60524 1076 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 STAG3L1P0CL83 205 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 ATP2B1P20020 1258 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 KCNC3Q14003 757 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 CALCRLQ16602 461 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 PTPN21Q16825 1174 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 ZNF484Q5JVG2 852 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 CKAP2LQ8IYA6 745 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 ATOH1Q92858 354 aaPredicted RBP17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 FAM167AQ96KS9 214 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 MTMR9Q96QG7 549 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 IRF2BPLQ9H1B7 796 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 S1PR5Q9H228 398 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 TMX1Q9H3N1 280 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 TLE6Q9H808 572 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 NRBP2Q9NSY0 501 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 PCDHA12Q9UN75 941 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 COL1A2P08123 1366 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 ZNF292O60281 2723 aa17.63■□□□□ 0.41
CHMP1A-206ENST00000549139 EML1O00423 815 aa17.62■□□□□ 0.41
CHMP1A-206ENST00000549139 RPLP2P05387 115 aaKnown RBP17.62■□□□□ 0.41
CHMP1A-206ENST00000549139 MCM7P33993 719 aa17.62■□□□□ 0.41
CHMP1A-206ENST00000549139 NUBP1P53384 320 aa17.62■□□□□ 0.41
CHMP1A-206ENST00000549139 IGBP1P78318 339 aa17.62■□□□□ 0.41
CHMP1A-206ENST00000549139 FOXK2Q01167 660 aa17.62■□□□□ 0.41
CHMP1A-206ENST00000549139 UBE3AQ05086 875 aa17.62■□□□□ 0.41
CHMP1A-206ENST00000549139 DUSP6Q16828 381 aa17.62■□□□□ 0.41
CHMP1A-206ENST00000549139 TTC38Q5R3I4 469 aa17.62■□□□□ 0.41
CHMP1A-206ENST00000549139 IER5Q5VY09 327 aa17.62■□□□□ 0.41
CHMP1A-206ENST00000549139 PCDHA2Q9Y5H9 948 aa17.62■□□□□ 0.41
CHMP1A-206ENST00000549139 H0Y858 1186 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 FSCN2O14926 492 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 ZNF862O60290 1169 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 PDGFBP01127 241 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 PDCP20941 246 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 TOB1P50616 345 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 ERVFC1P60507 584 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 SPIRE1Q08AE8 756 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 EPHA7Q15375 998 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 ZNF174Q15697 407 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 MCTP1Q6DN14 999 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 MTHFD1LQ6UB35 978 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 TMEM184AQ6ZMB5 413 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 CDCA3Q99618 268 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 FAM49AQ9H0Q0 323 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 TTC12Q9H892 705 aaPredicted RBP17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 TLR9Q9NR96 1032 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 CEP131Q9UPN4 1083 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 TRPV2Q9Y5S1 764 aa17.61■□□□□ 0.41
CHMP1A-206ENST00000549139 DKC1O60832 514 aaKnown RBP eCLIP17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 OATP04181 439 aa17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 P4HBP07237 508 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 KLRC1P26715 233 aa17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 TXKP42681 527 aa17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 PSMC5P62195 406 aa17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 UGCGQ16739 394 aa17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 HSCBQ8IWL3 235 aa17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 TRAPPC12Q8WVT3 735 aa17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 RIPOR3Q96MK2 946 aa17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 CELF4Q9BZC1 486 aaKnown RBP17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 TMEM60Q9H2L4 133 aa17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 KDM3AQ9Y4C1 1321 aa17.6■□□□□ 0.41
CHMP1A-206ENST00000549139 SMIM35A0A1B0GVV1 85 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 FSD2A1L4K1 749 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 ZBTB42B2RXF5 422 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 QARSP47897 775 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 SARSP49591 514 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 PRKCEQ02156 737 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 TMEM62Q0P6H9 643 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 PAK2Q13177 524 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 RILPL1Q5EBL4 403 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 XKR3Q5GH77 459 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 NCAPH2Q6IBW4 605 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 SYCE2Q6PIF2 218 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 ASCL5Q7RTU5 278 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 TRMT1LQ7Z2T5 733 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 NME8Q8N427 588 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 MICAL1Q8TDZ2 1067 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 NIFKQ9BYG3 293 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 PCDHB12Q9Y5F1 795 aa17.59■□□□□ 0.41
CHMP1A-206ENST00000549139 MAGEB2O15479 319 aa17.58■□□□□ 0.4
CHMP1A-206ENST00000549139 GALR2O43603 387 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-206ENST00000549139 MGEA5O60502 916 aa17.58■□□□□ 0.4
CHMP1A-206ENST00000549139 FGF18O76093 207 aa17.58■□□□□ 0.4
CHMP1A-206ENST00000549139 STBD1O95210 358 aa17.58■□□□□ 0.4
CHMP1A-206ENST00000549139 ANKRD54Q6NXT1 300 aa17.58■□□□□ 0.4
CHMP1A-206ENST00000549139 C4orf32Q8N8J7 132 aa17.58■□□□□ 0.4
CHMP1A-206ENST00000549139 HCSTQ9UBK5 93 aa17.58■□□□□ 0.4
CHMP1A-206ENST00000549139 LRFN2Q9ULH4 789 aa17.58■□□□□ 0.4
CHMP1A-206ENST00000549139 PCDHB6Q9Y5E3 794 aa17.58■□□□□ 0.4
CHMP1A-206ENST00000549139 ARID2Q68CP9 1835 aa17.57■□□□□ 0.4
CHMP1A-206ENST00000549139 OR52Z1P0C646 297 aa17.57■□□□□ 0.4
CHMP1A-206ENST00000549139 TARBP2Q15633 366 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms