RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 OPLAHO14841 1288 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 TBX3O15119 743 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 GDF11O95390 407 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 PAEPP09466 180 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 SREBF1P36956 1147 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 MARCKSL1P49006 195 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 DUPD1Q68J44 220 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 FBXO11Q86XK2 927 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 FBXO25Q8TCJ0 367 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 SLC20A1Q8WUM9 679 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 TLCD1Q96CP7 247 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 SYT11Q9BT88 431 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 INTS2Q9H0H0 1204 aaKnown RBP15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 GREB1LQ9C091 1923 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 CTNND1O60716 968 aaKnown RBP15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 GYS1P13807 737 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 DRD4P21917 467 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 DDR1Q08345 913 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 CERKLQ49MI3 558 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 KRT35Q92764 455 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 ZKSCAN4Q969J2 545 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 RNF25Q96BH1 459 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 DYDC2Q96IM9 177 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 NGLY1Q96IV0 654 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 FAM20AQ96MK3 541 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 SELENOSQ9BQE4 189 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 RAB17Q9H0T7 212 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 KCNQ5Q9NR82 932 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 OLFML3Q9NRN5 406 aa15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 TTC7AQ9ULT0 858 aaPredicted RBP15.31■□□□□ 0.04
RAPGEF3-218ENST00000548919 F5H6K3 240 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 TULP1O00294 542 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 TNFAIP3P21580 790 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 UBXN2AP68543 259 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 KLRC3Q07444 240 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 GKAP1Q5VSY0 366 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 JAMLQ86YT9 394 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 DCAF4Q8WV16 495 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 C5orf60A6NFR6 353 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 FOXN3O00409 490 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 CHN1P15882 459 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 SCTRP47872 440 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 PMS2P54278 862 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 IFI35P80217 286 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 PLCB4Q15147 1175 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 PHLDB3Q6NSJ2 640 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 ZDHHC24Q6UX98 284 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 BANK1Q8NDB2 785 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 XPO6Q96QU8 1125 aaKnown RBP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 GEMIN8Q9NWZ8 242 aaKnown RBP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 PPP1R12BO60237 982 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 SLITRK3O94933 977 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 MKRN4PQ13434 485 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 ZNF746Q6NUN9 644 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 C1orf186Q6ZWK4 172 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 SPICE1Q8N0Z3 855 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 MYCBPQ99417 103 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 POLR3CQ9BUI4 534 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 COA1Q9GZY4 146 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 MTFR1LQ9H019 292 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 CARD9Q9H257 536 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 APEX2Q9UBZ4 518 aa15.3■□□□□ 0.04
RAPGEF3-218ENST00000548919 ATP8B3O60423 1300 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 GOLGA6L10A0A0M3HER8 536 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 KIAA0391O15091 583 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 VCAM1P19320 739 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 MAP2K2P36507 400 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 SLCO1A2P46721 670 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 CDR1P51861 262 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 ICA1Q05084 483 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 DRP2Q13474 957 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 SLC29A2Q14542 456 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 KIAA1755Q5JYT7 1200 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 ERMARDQ5T6L9 678 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 CYB5D1Q6P9G0 228 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 ZDHHC14Q8IZN3 488 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 FUKQ8N0W3 1084 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 C3orf20Q8ND61 904 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 TEKT1Q969V4 418 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 HOOK2Q96ED9 719 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 CHMP6Q96FZ7 201 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 CCDC17Q96LX7 622 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 HSD17B14Q9BPX1 270 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 WDR18Q9BV38 432 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 ZC3H12CQ9C0D7 883 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 PABPC3Q9H361 631 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 AZI2Q9H6S1 392 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 ALG6Q9Y672 507 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 PPEF1O14829 653 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 NDUFB10O96000 172 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 MYL7Q01449 175 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 DENND2CQ68D51 928 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 NEK9Q8TD19 979 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 MKL1Q969V6 931 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 FIZ1Q96SL8 496 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 SEMA4AQ9H3S1 761 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 ACTR5Q9H9F9 607 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 PARVGQ9HBI0 331 aa15.29■□□□□ 0.04
RAPGEF3-218ENST00000548919 AGPAT3Q9NRZ7 376 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms