RNA–Protein interactions for RNA: ENST00000548311.5

TROAP-207, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-207ENST00000548311 TPH2Q8IWU9 490 aa17.12■□□□□ 0.33
TROAP-207ENST00000548311 ZNF579Q8NAF0 562 aaKnown RBP17.12■□□□□ 0.33
TROAP-207ENST00000548311 DACT1Q9NYF0 836 aa17.12■□□□□ 0.33
TROAP-207ENST00000548311 LIMCH1Q9UPQ0 1083 aa17.12■□□□□ 0.33
TROAP-207ENST00000548311 PIN4Q9Y237 131 aaKnown RBP17.12■□□□□ 0.33
TROAP-207ENST00000548311 PCDHGC5Q9Y5F6 944 aa17.12■□□□□ 0.33
TROAP-207ENST00000548311 LINC01565O15544 149 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 NEMFO60524 1076 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 FGF18O76093 207 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 LAG3P18627 525 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 NDUFV1P49821 464 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 COL19A1Q14993 1142 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 SAFBQ15424 915 aaKnown RBP eCLIP17.11■□□□□ 0.33
TROAP-207ENST00000548311 XKR9Q5GH70 373 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 TWF2Q6IBS0 349 aaKnown RBP17.11■□□□□ 0.33
TROAP-207ENST00000548311 OTUD6AQ7L8S5 288 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 CATSPER4Q7RTX7 472 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 ADGRD2Q7Z7M1 963 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 LRRC43Q8N309 656 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 TMEM143Q96AN5 459 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 CASD1Q96PB1 797 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 INO80BQ9C086 356 aaPredicted RBP17.11■□□□□ 0.33
TROAP-207ENST00000548311 CWH43Q9H720 699 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 ZSWIM4Q9H7M6 989 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 RNF19AQ9NV58 838 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 FAM50BQ9Y247 325 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 COL4A3BPQ9Y5P4 624 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 PLXNA4Q9HCM2 1894 aa17.11■□□□□ 0.33
TROAP-207ENST00000548311 A0A0U1RQF3 1178 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 SRGAP2CP0DJJ0 459 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 LTBRP36941 435 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 PBX3P40426 434 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 RFC5P40937 340 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 NRIP1P48552 1158 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 DLX2Q07687 328 aaPredicted RBP17.1■□□□□ 0.33
TROAP-207ENST00000548311 SPIRE1Q08AE8 756 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 CSPP1Q1MSJ5 1256 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 CTC1Q2NKJ3 1217 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 LONRF3Q496Y0 759 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 CLLU1OSQ5K130 101 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 FAM178BQ8IXR5 827 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 C4orf19Q8IY42 314 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 EXOC8Q8IYI6 725 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 HELQQ8TDG4 1101 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 PSPC1Q8WXF1 523 aaKnown RBP17.1■□□□□ 0.33
TROAP-207ENST00000548311 EIF2AK1Q9BQI3 630 aaKnown RBP17.1■□□□□ 0.33
TROAP-207ENST00000548311 TLR9Q9NR96 1032 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 PCDHA12Q9UN75 941 aa17.1■□□□□ 0.33
TROAP-207ENST00000548311 WNT7AO00755 349 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 ZBTB39O15060 712 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 TBX10O75333 385 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 TXKP42681 527 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 UBE3AQ05086 875 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 EMC2Q15006 297 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 LRRC55Q6ZSA7 311 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 GJD3Q8N144 294 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 PRPF31Q8WWY3 499 aaKnown RBP17.09■□□□□ 0.33
TROAP-207ENST00000548311 C8orf76Q96K31 380 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 CCDC43Q96MW1 224 aaKnown RBP17.09■□□□□ 0.33
TROAP-207ENST00000548311 ZNF558Q96NG5 402 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 EPHX3Q9H6B9 360 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 DHX33Q9H6R0 707 aaKnown RBP17.09■□□□□ 0.33
TROAP-207ENST00000548311 TTC12Q9H892 705 aaPredicted RBP17.09■□□□□ 0.33
TROAP-207ENST00000548311 CD320Q9NPF0 282 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 CHST12Q9NRB3 414 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 PPME1Q9Y570 386 aa17.09■□□□□ 0.33
TROAP-207ENST00000548311 EOMESO95936 686 aa17.08■□□□□ 0.32
TROAP-207ENST00000548311 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.32
TROAP-207ENST00000548311 MCM7P33993 719 aa17.08■□□□□ 0.32
TROAP-207ENST00000548311 PHKA2P46019 1235 aa17.08■□□□□ 0.32
TROAP-207ENST00000548311 LAMTOR4Q0VGL1 99 aa17.08■□□□□ 0.32
TROAP-207ENST00000548311 PLPP4Q5VZY2 271 aa17.08■□□□□ 0.32
TROAP-207ENST00000548311 KCNT2Q6UVM3 1135 aa17.08■□□□□ 0.32
TROAP-207ENST00000548311 ZNF598Q86UK7 904 aaKnown RBP17.08■□□□□ 0.32
TROAP-207ENST00000548311 LPPQ93052 612 aa17.08■□□□□ 0.32
TROAP-207ENST00000548311 C1QTNF1Q9BXJ1 281 aa17.08■□□□□ 0.32
TROAP-207ENST00000548311 TLE6Q9H808 572 aa17.08■□□□□ 0.32
TROAP-207ENST00000548311 ENTPD7Q9NQZ7 604 aa17.08■□□□□ 0.32
TROAP-207ENST00000548311 PUF60Q9UHX1 559 aaKnown RBP17.08■□□□□ 0.32
TROAP-207ENST00000548311 CD207Q9UJ71 328 aa17.08■□□□□ 0.32
TROAP-207ENST00000548311 PER2O15055 1255 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 SLITRK3O94933 977 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 PPM1AP35813 382 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 ERVFC1P60507 584 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 ADAM15Q13444 863 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 GNL2Q13823 731 aaKnown RBP17.07■□□□□ 0.32
TROAP-207ENST00000548311 C8orf34Q49A92 452 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 EFHBQ8N7U6 833 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 FAM184AQ8NB25 1140 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 TCP11Q8WWU5 503 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.32
TROAP-207ENST00000548311 MTRQ99707 1265 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 LLPHQ9BRT6 129 aaKnown RBP17.07■□□□□ 0.32
TROAP-207ENST00000548311 MRPL9Q9BYD2 267 aaKnown RBP17.07■□□□□ 0.32
TROAP-207ENST00000548311 IFT122Q9HBG6 1241 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 INPP5FQ9Y2H2 1132 aa17.07■□□□□ 0.32
TROAP-207ENST00000548311 C5orf42Q9H799 3197 aa17.06■□□□□ 0.32
TROAP-207ENST00000548311 ARID2Q68CP9 1835 aa17.06■□□□□ 0.32
TROAP-207ENST00000548311 GAS2O43903 313 aaKnown RBP17.06■□□□□ 0.32
TROAP-207ENST00000548311 SKIP12755 728 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms