RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CDHR5Q9HBB8 845 aa19.28■□□□□ 0.68
HDAC7-227ENST00000548080 MUTP22033 750 aa19.27■□□□□ 0.67
HDAC7-227ENST00000548080 MGAT3Q09327 533 aa19.27■□□□□ 0.67
HDAC7-227ENST00000548080 MKRN4PQ13434 485 aaPredicted RBP19.27■□□□□ 0.67
HDAC7-227ENST00000548080 MORC3Q14149 939 aa19.27■□□□□ 0.67
HDAC7-227ENST00000548080 MCM6Q14566 821 aa19.27■□□□□ 0.67
HDAC7-227ENST00000548080 C11orf57Q6ZUT1 292 aaPredicted RBP19.27■□□□□ 0.67
HDAC7-227ENST00000548080 LINC01465Q8N7H1 131 aa19.27■□□□□ 0.67
HDAC7-227ENST00000548080 AKT3Q9Y243 479 aa19.27■□□□□ 0.67
HDAC7-227ENST00000548080 GHRP10912 638 aa19.26■□□□□ 0.67
HDAC7-227ENST00000548080 ZNF165P49910 485 aa19.26■□□□□ 0.67
HDAC7-227ENST00000548080 DHX8Q14562 1220 aaKnown RBP19.26■□□□□ 0.67
HDAC7-227ENST00000548080 KIZQ2M2Z5 673 aa19.26■□□□□ 0.67
HDAC7-227ENST00000548080 TDHQ8IZJ6 230 aa19.26■□□□□ 0.67
HDAC7-227ENST00000548080 NAT10Q9H0A0 1025 aaKnown RBP19.26■□□□□ 0.67
HDAC7-227ENST00000548080 DNM3Q9UQ16 869 aa19.26■□□□□ 0.67
HDAC7-227ENST00000548080 E9PMD0 336 aa19.25■□□□□ 0.67
HDAC7-227ENST00000548080 MAGEB2O15479 319 aa19.25■□□□□ 0.67
HDAC7-227ENST00000548080 LYPLA2O95372 231 aa19.25■□□□□ 0.67
HDAC7-227ENST00000548080 FGBP02675 491 aa19.25■□□□□ 0.67
HDAC7-227ENST00000548080 RPN1P04843 607 aaKnown RBP19.25■□□□□ 0.67
HDAC7-227ENST00000548080 DPCR1Q3MIW9 517 aa19.25■□□□□ 0.67
HDAC7-227ENST00000548080 FAM26DQ5JW98 314 aa19.25■□□□□ 0.67
HDAC7-227ENST00000548080 OTUD6AQ7L8S5 288 aa19.25■□□□□ 0.67
HDAC7-227ENST00000548080 RPUSD2Q8IZ73 545 aaKnown RBP19.25■□□□□ 0.67
HDAC7-227ENST00000548080 RNPC3Q96LT9 517 aaKnown RBP19.25■□□□□ 0.67
HDAC7-227ENST00000548080 CCDC43Q96MW1 224 aaKnown RBP19.25■□□□□ 0.67
HDAC7-227ENST00000548080 TRIM9Q9C026 710 aa19.25■□□□□ 0.67
HDAC7-227ENST00000548080 CBX8Q9HC52 389 aa19.25■□□□□ 0.67
HDAC7-227ENST00000548080 RMND1Q9NWS8 449 aa19.25■□□□□ 0.67
HDAC7-227ENST00000548080 CXXC1Q9P0U4 656 aaPredicted RBP19.25■□□□□ 0.67
HDAC7-227ENST00000548080 TRPV2Q9Y5S1 764 aa19.25■□□□□ 0.67
HDAC7-227ENST00000548080 ZBBXA8MT70 800 aa19.24■□□□□ 0.67
HDAC7-227ENST00000548080 USO1O60763 962 aaKnown RBP19.24■□□□□ 0.67
HDAC7-227ENST00000548080 CAND2O75155 1236 aa19.24■□□□□ 0.67
HDAC7-227ENST00000548080 MAFO75444 373 aaPredicted RBP19.24■□□□□ 0.67
HDAC7-227ENST00000548080 PLA2G4BP0C869 781 aa19.24■□□□□ 0.67
HDAC7-227ENST00000548080 RFC2P35250 354 aa19.24■□□□□ 0.67
HDAC7-227ENST00000548080 POLGP54098 1239 aaPredicted RBP19.24■□□□□ 0.67
HDAC7-227ENST00000548080 UVSSAQ2YD98 709 aa19.24■□□□□ 0.67
HDAC7-227ENST00000548080 PSRC1Q6PGN9 363 aaPredicted RBP19.24■□□□□ 0.67
HDAC7-227ENST00000548080 RPAINQ86UA6 219 aa19.24■□□□□ 0.67
HDAC7-227ENST00000548080 TMEM143Q96AN5 459 aa19.24■□□□□ 0.67
HDAC7-227ENST00000548080 MAP7D2Q96T17 732 aa19.24■□□□□ 0.67
HDAC7-227ENST00000548080 MYMKA6NI61 221 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 M0QZ92 97 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 CXCL10P02778 98 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 XRCC6P12956 609 aaKnown RBP eCLIP19.23■□□□□ 0.676e-6■■■■■ 31.4
HDAC7-227ENST00000548080 BMP6P22004 513 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 RARRES1P49788 294 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 LPIN1Q14693 890 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 EMC2Q15006 297 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 CNNM4Q6P4Q7 775 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 MAEAQ7L5Y9 396 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 KSR1Q8IVT5 923 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 MLKLQ8NB16 471 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 DBF4BQ8NFT6 615 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 OSMRQ99650 979 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 CELF4Q9BZC1 486 aaKnown RBP19.23■□□□□ 0.67
HDAC7-227ENST00000548080 XPNPEP1Q9NQW7 623 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 ANKEF1Q9NU02 776 aa19.23■□□□□ 0.67
HDAC7-227ENST00000548080 IGKV6-21A0A0C4DH24 114 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 KLRC4O43908 158 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 EYA4O95677 639 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 SSBP05455 408 aaKnown RBP eCLIP19.22■□□□□ 0.67
HDAC7-227ENST00000548080 TMOD1P28289 359 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 NLRP11P59045 1033 aaKnown RBP19.22■□□□□ 0.67
HDAC7-227ENST00000548080 ASIC1P78348 528 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 KCNB1Q14721 858 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 HABP4Q5JVS0 413 aaKnown RBP19.22■□□□□ 0.67
HDAC7-227ENST00000548080 FBXO47Q5MNV8 452 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 IER5Q5VY09 327 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 FAM109BQ6ICB4 259 aaPredicted RBP19.22■□□□□ 0.67
HDAC7-227ENST00000548080 TMEM40Q8WWA1 233 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 SLC7A3Q8WY07 619 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 CCDC47Q96A33 483 aaKnown RBP19.22■□□□□ 0.67
HDAC7-227ENST00000548080 NACC1Q96RE7 527 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 BPIFA3Q9BQP9 254 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 DHX33Q9H6R0 707 aaKnown RBP19.22■□□□□ 0.67
HDAC7-227ENST00000548080 AGO3Q9H9G7 860 aaKnown RBP19.22■□□□□ 0.67
HDAC7-227ENST00000548080 POLD4Q9HCU8 107 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 SUCLA2Q9P2R7 463 aaPredicted RBP19.22■□□□□ 0.67
HDAC7-227ENST00000548080 LAMA3Q16787 3333 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 LAMA2P24043 3122 aaKnown RBP19.22■□□□□ 0.67
HDAC7-227ENST00000548080 GPR32O75388 356 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 CD52P31358 61 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 IQCB1Q15051 598 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 RHPN2Q8IUC4 686 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 NME8Q8N427 588 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 SYT2Q8N9I0 419 aaPredicted RBP19.22■□□□□ 0.67
HDAC7-227ENST00000548080 SCLT1Q96NL6 688 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 DACH1Q9UI36 760 aa19.22■□□□□ 0.67
HDAC7-227ENST00000548080 PTPRSQ13332 1948 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 ARHGEF35A5YM69 484 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 GRXCR1A8MXD5 290 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 SOX1O00570 391 aaPredicted RBP19.21■□□□□ 0.67
HDAC7-227ENST00000548080 CSDE1O75534 798 aaKnown RBP19.21■□□□□ 0.67
HDAC7-227ENST00000548080 DEKP35659 375 aaKnown RBP19.21■□□□□ 0.67
HDAC7-227ENST00000548080 RFC5P40937 340 aa19.21■□□□□ 0.67
HDAC7-227ENST00000548080 SLC12A3P55017 1021 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms