RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 EMILIN2Q9BXX0 1053 aa10.28□□□□□ -0.76
AC055716.3-201ENST00000547533 ZMYND12Q9H0C1 365 aa10.28□□□□□ -0.76
AC055716.3-201ENST00000547533 FAM86C1Q9NVL1 165 aa10.28□□□□□ -0.76
AC055716.3-201ENST00000547533 USTQ9Y2C2 406 aa10.28□□□□□ -0.76
AC055716.3-201ENST00000547533 ZFHX2Q9C0A1 2572 aaPredicted RBP10.28□□□□□ -0.76
AC055716.3-201ENST00000547533 CACNA1HO95180 2353 aa10.28□□□□□ -0.76
AC055716.3-201ENST00000547533 IGLV3-22A0A075B6J6 115 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 C2orf71A6NGG8 1288 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 CHMP2AO43633 222 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 CLASP2O75122 1294 aaKnown RBP10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 ATP4AP20648 1035 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 USP11P51784 963 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 BCAR1P56945 870 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 NONOQ15233 471 aaKnown RBP eCLIP10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 RARS2Q5T160 578 aaKnown RBP10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 LRCH2Q5VUJ6 765 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 KIAA1841Q6NSI8 718 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 LRRC55Q6ZSA7 311 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 OTOP3Q7RTS5 596 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 ZDHHC14Q8IZN3 488 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 VPS52Q8N1B4 723 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 RDM1Q8NG50 284 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 CCDC136Q96JN2 1154 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 RIT2Q99578 217 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 ADAMTS10Q9H324 1103 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 POMKQ9H5K3 350 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 CYP26B1Q9NR63 512 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 HCSTQ9UBK5 93 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 SEPT9Q9UHD8 586 aaPredicted RBP10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 BRPF3Q9ULD4 1205 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 SSX2IPQ9Y2D8 614 aa10.27□□□□□ -0.77
AC055716.3-201ENST00000547533 C2CD4DB7Z1M9 353 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 PRPF3O43395 683 aaKnown RBP10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 DKC1O60832 514 aaKnown RBP eCLIP10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 CIITAP33076 1130 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 PBX3P40426 434 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 EXOSC10Q01780 885 aaKnown RBP10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 TSGA10IPQ3SY00 556 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 XKR3Q5GH77 459 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 CLLU1OSQ5K130 101 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 CCDC149Q6ZUS6 474 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 MIER3Q7Z3K6 550 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 DDX53Q86TM3 631 aaKnown RBP10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 ZNF410Q86VK4 478 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 TRIM22Q8IYM9 498 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 NKD2Q969F2 451 aaPredicted RBP10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 TCEANC2Q96MN5 208 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 SFXN1Q9H9B4 322 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 KANSL3Q9P2N6 904 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 FBXL21Q9UKT6 434 aa10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 PIN4Q9Y237 131 aaKnown RBP10.26□□□□□ -0.77
AC055716.3-201ENST00000547533 PROB1E7EW31 1015 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 NR1I2O75469 434 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 BRD1O95696 1058 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 CTSAP10619 480 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 KLRC2P26717 231 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 CDC27P30260 824 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 ADD1P35611 737 aaKnown RBP10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 PHKA2P46019 1235 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 CLCN5P51795 746 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 NLRP5P59047 1200 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 NCBP1Q09161 790 aaKnown RBP10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 FUT2Q10981 343 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 MTERF2Q49AM1 385 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 BMP2KLQ5H9B9 411 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 NOMO2Q5JPE7 1267 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 CATSPER4Q7RTX7 472 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 ZNF598Q86UK7 904 aaKnown RBP10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 CRYGNQ8WXF5 182 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 STAMQ92783 540 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 IGSF21Q96ID5 467 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 RTP3Q9BQQ7 232 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 TRAIPQ9BWF2 469 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 RNF26Q9BY78 433 aaPredicted RBP10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 ZBP1Q9H171 429 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 SH3GLB2Q9NR46 395 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 LIMD1Q9UGP4 676 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 INPP5FQ9Y2H2 1132 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 IRAK3Q9Y616 596 aa10.25□□□□□ -0.77
AC055716.3-201ENST00000547533 PLXNA3P51805 1871 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 DENND4AQ7Z401 1863 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 NT5C1B-RDH14C9J2C7 533 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 STK25O00506 426 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 PSMA5P28066 241 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 NBL1P41271 181 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 BLOC1S2Q6QNY1 142 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 Q6ZUG5 572 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 RHPN2Q8IUC4 686 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 LINC01465Q8N7H1 131 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 FLCNQ8NFG4 579 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 SLC7A3Q8WY07 619 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 BRF1Q92994 677 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 ZNF668Q96K58 619 aaPredicted RBP10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 NIFKQ9BYG3 293 aaKnown RBP10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 GBP3Q9H0R5 595 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 UBN1Q9NPG3 1134 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 MRPL17Q9NRX2 175 aaKnown RBP10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 FAM105AQ9NUU6 356 aa10.24□□□□□ -0.77
AC055716.3-201ENST00000547533 RNF19AQ9NV58 838 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms