RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 SIK3Q9Y2K2 1263 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 RTL9Q8NET4 1388 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 PALM3A6NDB9 673 aaPredicted RBP12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 KLRC4O43908 158 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 KPNB1Q14974 876 aaKnown RBP12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 MAP7D1Q3KQU3 841 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 SPATA24Q86W54 205 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 APLFQ8IW19 511 aaPredicted RBP12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 AGGF1Q8N302 714 aaeCLIP12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 LCORLQ8N3X6 602 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 TUBGCP5Q96RT8 1024 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 ORAI2Q96SN7 254 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 DCTN4Q9UJW0 460 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 TACC3Q9Y6A5 838 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 GJA8P48165 433 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 ZCWPW2Q504Y3 356 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 OLFML1Q6UWY5 402 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 TBC1D16Q8TBP0 767 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 EPB41L4AQ9HCS5 686 aaPredicted RBP12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 TMCO1Q9UM00 188 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 TOPAZ1Q8N9V7 1692 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 MYH6P13533 1939 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 CYP1A1P04798 512 aaPredicted RBP12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 LONP1P36776 959 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 ASIC2Q16515 512 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 LRRC74BQ6ZQY2 392 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 TRMT1LQ7Z2T5 733 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 THEMISQ8N1K5 641 aaPredicted RBP12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 PDP2Q9P2J9 529 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 ZNF180Q9UJW8 692 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 TMEM59LQ9UK28 342 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 PIK3C2AO00443 1686 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 SSU72P8A0A1W2PR75 194 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 USP17L12C9JPN9 530 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 USP17L21D6R901 530 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 LYNP07948 512 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 VIL1P09327 827 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 UBE3CQ15386 1083 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 TMEM266Q2M3C6 531 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 PDCD7Q8N8D1 485 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 PRPF31Q8WWY3 499 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 PGM2Q96G03 612 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 SLCO1B3Q9NPD5 702 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 MTRF1LQ9UGC7 380 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 SPAG7O75391 227 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 OR6B1O95007 311 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 MARK3P27448 753 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 BCAMP50895 628 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 CDR2Q01850 454 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 AUHQ13825 339 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 ASTE1Q2TB18 679 aaPredicted RBP12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 NAALADL2Q58DX5 795 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 NRG4Q8WWG1 115 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 BAP1Q92560 729 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 SEC63Q9UGP8 760 aaKnown RBP12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 SERPINA10Q9UK55 444 aa12.82□□□□□ -0.36
RBFOX1-208ENST00000547372 CFAP69A5D8W1 941 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 STK10O94804 968 aaKnown RBP12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 SERPING1P05155 500 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 SCG2P13521 617 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 CYP11B2P19099 503 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 USP11P51784 963 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 EXOC3L4Q17RC7 722 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 CCDC152Q4G0S7 254 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 TRIM50Q86XT4 487 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 BLIDQ8IZY5 108 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 TTLL11Q8NHH1 800 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 FAM136AQ96C01 138 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 ZSCAN10Q96SZ4 725 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 TAOK3Q9H2K8 898 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 USP20Q9Y2K6 914 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 WDR91A4D1P6 747 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 MAPK13O15264 365 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 ZNF24P17028 368 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 ADARP55265 1226 aaKnown RBP12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 SLC18A3Q16572 532 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 LIN52Q52LA3 116 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 TAF1BQ53T94 588 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 ZNF444Q8N0Y2 327 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 DCAF5Q96JK2 942 aa12.81□□□□□ -0.36
RBFOX1-208ENST00000547372 E7ENQ6 273 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 BOLA2-SMG1P6H3BVE0 249 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 CCDC188H7C350 402 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 TLR2O60603 784 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 TBX10O75333 385 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 PGM3O95394 542 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 BAG3O95817 575 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 PYGMP11217 842 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 VEGFAP15692 232 aaPredicted RBP12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 PLCG1P19174 1290 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 ZBTB16Q05516 673 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 PPP2R5CQ13362 524 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 LRP10Q7Z4F1 713 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 ERP44Q9BS26 406 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 LARSQ9P2J5 1176 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 ARMCX3Q9UH62 379 aaPredicted RBP12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 WASF2Q9Y6W5 498 aa12.8□□□□□ -0.36
RBFOX1-208ENST00000547372 TRIM43BA6NCK2 446 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms