RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 ZDHHC15Q96MV8 337 aa14.88□□□□□ -0.03
SLC38A1-204ENST00000546893 NOD2Q9HC29 1040 aa14.88□□□□□ -0.03
SLC38A1-204ENST00000546893 DDX4Q9NQI0 724 aaKnown RBP14.88□□□□□ -0.03
SLC38A1-204ENST00000546893 PI4KBQ9UBF8 816 aa14.88□□□□□ -0.03
SLC38A1-204ENST00000546893 NCANO14594 1321 aa14.88□□□□□ -0.03
SLC38A1-204ENST00000546893 MYH10P35580 1976 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 ZNF233A6NK53 670 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 GCOM1H8Y6P7 765 aaPredicted RBP14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 MEIS2O14770 477 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 RAD51CO43502 376 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 MYZAPP0CAP1 466 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 PSMC2P35998 433 aaKnown RBP14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 EIF3BP55884 814 aaKnown RBP14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 ANKRD20A8PQ5CZ79 823 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 CDC42EP5Q6NZY7 148 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 PEX26Q7Z412 305 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 NLRP14Q86W24 1093 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 RNPC3Q96LT9 517 aaKnown RBP14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 ZNF570Q96NI8 536 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 REEP2Q9BRK0 252 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 EHMT1Q9H9B1 1298 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 PRDM16Q9HAZ2 1276 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 TMBIM4Q9HC24 238 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 TBC1D7Q9P0N9 293 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 UBR3Q6ZT12 1888 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 BUB1BO60566 1050 aaPredicted RBP14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 PPP1R37O75864 691 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 TMEM253P0C7T8 217 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 HSPA6P17066 643 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 ABCD1P33897 745 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 RANBP1P43487 201 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 PAPOLAP51003 745 aaKnown RBP14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 EIF6P56537 245 aaKnown RBP14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 BTNL9Q6UXG8 535 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 KCTD1Q719H9 257 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 AMIGO3Q86WK7 504 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 FBXO11Q86XK2 927 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 SFR1Q86XK3 245 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 IDI2Q9BXS1 227 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 RAB17Q9H0T7 212 aa14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 SUDS3Q9H7L9 328 aaPredicted RBP14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 COL2A1P02458 1487 aaPredicted RBP14.87□□□□□ -0.03
SLC38A1-204ENST00000546893 ZSCAN9O15535 394 aaPredicted RBP14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 SPATA31C1P0DKV0 1188 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 MDH1P40925 334 aaKnown RBP14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 ZNF772Q68DY9 489 aaPredicted RBP14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 SLC35C1Q96A29 364 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 STK33Q9BYT3 514 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 ZHX3Q9H4I2 956 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 RGL1Q9NZL6 768 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 EHD2Q9NZN4 543 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 AMFRQ9UKV5 643 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 BLOC1S6Q9UL45 172 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 STXBP5LQ9Y2K9 1186 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 RABGAP1Q9Y3P9 1069 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 POTEFA5A3E0 1075 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 USP17L15C9J2P7 530 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 USP17L13C9JLJ4 530 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 USP17L11C9JVI0 530 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 USP17L18D6R9N7 530 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 USP17L22D6RA61 530 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 USP17L17D6RBQ6 530 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 USP17L19D6RCP7 530 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 USP17L20D6RJB6 530 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 CEP104O60308 925 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 ALDH1B1P30837 517 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 SLC16A2P36021 539 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 USP17L24Q0WX57 530 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 TCEAL1Q15170 157 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 CERKLQ49MI3 558 aaPredicted RBP14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 TATDN1Q6P1N9 297 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 USP17L6PQ6QN14 398 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 POTEGQ6S5H5 508 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 POTEEQ6S8J3 1075 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 RBM12BQ8IXT5 1001 aaKnown RBP14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 TMEM174Q8WUU8 243 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 HES6Q96HZ4 224 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 PLEKHG4BQ96PX9 1271 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 PSMD1Q99460 953 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 FGFBP2Q9BYJ0 223 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 KDM4CQ9H3R0 1056 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 SMARCAL1Q9NZC9 954 aa14.86□□□□□ -0.03
SLC38A1-204ENST00000546893 GOLGA6L10A0A0M3HER8 536 aa14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 SCTRP47872 440 aa14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 HADHBP55084 474 aaKnown RBP14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 ELF3P78545 371 aaPredicted RBP14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 ROR2Q01974 943 aaKnown RBP14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 ARID5AQ03989 594 aa14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 HLTFQ14527 1009 aaKnown RBP eCLIP14.85□□□□□ -0.032e-7■■■■■ 27.2
SLC38A1-204ENST00000546893 PRR16Q569H4 304 aa14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 APOBEC3HQ6NTF7 200 aaKnown RBP14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 HS2ST1Q7LGA3 356 aa14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 PODNQ7Z5L7 613 aa14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 TAX1BP1Q86VP1 789 aa14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 RFFLQ8WZ73 363 aa14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 P3H4Q92791 437 aa14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 FAM129AQ9BZQ8 928 aa14.85□□□□□ -0.03
SLC38A1-204ENST00000546893 PAPOLBQ9NRJ5 636 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms