RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 TXLNGYQ9BZA5 131 aa16.58■□□□□ 0.25
CNN3-207ENST00000545882 INTS2Q9H0H0 1204 aaKnown RBP16.58■□□□□ 0.25
CNN3-207ENST00000545882 DPH5Q9H2P9 285 aa16.58■□□□□ 0.25
CNN3-207ENST00000545882 CENPHQ9H3R5 247 aa16.58■□□□□ 0.25
CNN3-207ENST00000545882 ERVK-5Q9HDB9 667 aa16.58■□□□□ 0.25
CNN3-207ENST00000545882 AGPAT3Q9NRZ7 376 aa16.58■□□□□ 0.25
CNN3-207ENST00000545882 COG5Q9UP83 839 aa16.58■□□□□ 0.25
CNN3-207ENST00000545882 RGPD3A6NKT7 1758 aaPredicted RBP16.58■□□□□ 0.24
CNN3-207ENST00000545882 RGPD4Q7Z3J3 1758 aa16.58■□□□□ 0.24
CNN3-207ENST00000545882 FAM170AA1A519 330 aa16.58■□□□□ 0.24
CNN3-207ENST00000545882 GOLGA6L10A6NI86 522 aa16.58■□□□□ 0.24
CNN3-207ENST00000545882 ABCB4P21439 1286 aa16.58■□□□□ 0.24
CNN3-207ENST00000545882 AGBL2Q5U5Z8 902 aa16.58■□□□□ 0.24
CNN3-207ENST00000545882 LRCH2Q5VUJ6 765 aa16.58■□□□□ 0.24
CNN3-207ENST00000545882 ICE2Q659A1 982 aa16.58■□□□□ 0.24
CNN3-207ENST00000545882 SPICE1Q8N0Z3 855 aa16.58■□□□□ 0.24
CNN3-207ENST00000545882 BANK1Q8NDB2 785 aa16.58■□□□□ 0.24
CNN3-207ENST00000545882 LMO3Q8TAP4 145 aa16.58■□□□□ 0.24
CNN3-207ENST00000545882 TMX4Q9H1E5 349 aaPredicted RBP16.58■□□□□ 0.24
CNN3-207ENST00000545882 ZNFX1Q9P2E3 1918 aaKnown RBP16.57■□□□□ 0.24
CNN3-207ENST00000545882 FAM107AO95990 144 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 CYP2J2P51589 502 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 PPARDQ03181 441 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 BIRC3Q13489 604 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 MTMR3Q13615 1198 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 FBXW10Q5XX13 1052 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 PHLDB3Q6NSJ2 640 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 C6orf89Q6UWU4 347 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 STRA6Q9BX79 667 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 FAM114A2Q9NRY5 505 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 TNS1Q9HBL0 1735 aaKnown RBP16.57■□□□□ 0.24
CNN3-207ENST00000545882 UBE4BO95155 1302 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 DCDC2CA8MYV0 355 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 E7EVH7 732 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 APBA3O96018 575 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 TMOD1P28289 359 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 COPB2P35606 906 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 PRELPP51888 382 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 PTENP60484 403 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 UBXN2AP68543 259 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 DHX9Q08211 1270 aaKnown RBP16.57■□□□□ 0.24
CNN3-207ENST00000545882 KIF22Q14807 665 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 STYK1Q6J9G0 422 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 KCNV1Q6PIU1 500 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 RUFY4Q6ZNE9 571 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 MMS22LQ6ZRQ5 1243 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 SUGP1Q8IWZ8 645 aaKnown RBP16.57■□□□□ 0.24
CNN3-207ENST00000545882 ARFGAP2Q8N6H7 521 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 THAP2Q9H0W7 228 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 APEX2Q9UBZ4 518 aa16.57■□□□□ 0.24
CNN3-207ENST00000545882 ATRNL1Q5VV63 1379 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 FOXN3O00409 490 aaPredicted RBP16.56■□□□□ 0.24
CNN3-207ENST00000545882 PPP1R12BO60237 982 aaPredicted RBP16.56■□□□□ 0.24
CNN3-207ENST00000545882 ECE2O60344 883 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 PPFIA2O75334 1257 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 FSBPO95073 299 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 CFBP00751 764 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 MAPK7Q13164 816 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 PPP2R5AQ15172 486 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 DUPD1Q68J44 220 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 YTHDF3Q7Z739 585 aaKnown RBP16.56■□□□□ 0.24
CNN3-207ENST00000545882 FAM178BQ8IXR5 827 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 CNPY4Q8N129 248 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 CTNNBL1Q8WYA6 563 aaPredicted RBP16.56■□□□□ 0.24
CNN3-207ENST00000545882 ALG3Q92685 438 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 ZNF622Q969S3 477 aaKnown RBP eCLIP16.56■□□□□ 0.24
CNN3-207ENST00000545882 CARD9Q9H257 536 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 EPB41L4BQ9H329 900 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 TDRD3Q9H7E2 651 aaKnown RBP16.56■□□□□ 0.24
CNN3-207ENST00000545882 PPANQ9NQ55 473 aaKnown RBP16.56■□□□□ 0.24
CNN3-207ENST00000545882 ZDHHC18Q9NUE0 388 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 SEL1LQ9UBV2 794 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 GGA2Q9UJY4 613 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 SERPINA10Q9UK55 444 aa16.56■□□□□ 0.24
CNN3-207ENST00000545882 NOVA2Q9UNW9 492 aaKnown RBP16.56■□□□□ 0.24
CNN3-207ENST00000545882 DIS3Q9Y2L1 958 aaKnown RBP16.56■□□□□ 0.24
CNN3-207ENST00000545882 LRRN2O75325 713 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 ARP10275 920 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 TNFAIP3P21580 790 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 ECE1P42892 770 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 PPP2R2AP63151 447 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 ZNF211Q13398 564 aaPredicted RBP16.55■□□□□ 0.24
CNN3-207ENST00000545882 ARHGAP44Q17R89 818 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 RBM26Q5T8P6 1007 aaKnown RBP16.55■□□□□ 0.24
CNN3-207ENST00000545882 B3GNT9Q6UX72 402 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 DAW1Q8N136 415 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 OTUD6BQ8N6M0 293 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 TRIM31Q9BZY9 425 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 UNC45AQ9H3U1 944 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 UTP11Q9Y3A2 253 aaKnown RBP16.55■□□□□ 0.24
CNN3-207ENST00000545882 CAPN7Q9Y6W3 813 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 COL2A1P02458 1487 aaPredicted RBP16.55■□□□□ 0.24
CNN3-207ENST00000545882 ANKRD62A6NC57 917 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 TRAPPC3O43617 180 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 VCAM1P19320 739 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 HNRNPH1P31943 449 aaKnown RBP16.55■□□□□ 0.24
CNN3-207ENST00000545882 MYL7Q01449 175 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 QPCTQ16769 361 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 ODR4Q5SWX8 454 aa16.55■□□□□ 0.24
CNN3-207ENST00000545882 MSL1Q68DK7 614 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms