RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ADCY2Q08462 1091 aa6.93□□□□□ -1.3
SNHG1-224ENST00000545688 SPTY2D1Q68D10 685 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-224ENST00000545688 USP51Q70EK9 711 aa6.93□□□□□ -1.3
SNHG1-224ENST00000545688 KANSL1Q7Z3B3 1105 aa6.93□□□□□ -1.3
SNHG1-224ENST00000545688 CLEC14AQ86T13 490 aa6.93□□□□□ -1.3
SNHG1-224ENST00000545688 DHX37Q8IY37 1157 aaKnown RBP6.93□□□□□ -1.3
SNHG1-224ENST00000545688 PITHD1Q9GZP4 211 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-224ENST00000545688 CSRNP2Q9H175 543 aa6.93□□□□□ -1.3
SNHG1-224ENST00000545688 MTG2Q9H4K7 406 aa6.93□□□□□ -1.3
SNHG1-224ENST00000545688 IFT57Q9NWB7 429 aa6.93□□□□□ -1.3
SNHG1-224ENST00000545688 THG1LQ9NWX6 298 aaKnown RBP6.93□□□□□ -1.3
SNHG1-224ENST00000545688 SH3BP1Q9Y3L3 701 aa6.93□□□□□ -1.3
SNHG1-224ENST00000545688 MRPL42Q9Y6G3 142 aaKnown RBP6.93□□□□□ -1.3
SNHG1-224ENST00000545688 HNRNPLP14866 589 aaKnown RBP eCLIP6.92□□□□□ -1.3
SNHG1-224ENST00000545688 IGFL4Q6B9Z1 124 aa6.92□□□□□ -1.3
SNHG1-224ENST00000545688 KIAA1841Q6NSI8 718 aa6.92□□□□□ -1.3
SNHG1-224ENST00000545688 TIGD7Q6NT04 549 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-224ENST00000545688 UNQ6494/PRO21346Q6UXR6 183 aa6.92□□□□□ -1.3
SNHG1-224ENST00000545688 GAREM2Q75VX8 874 aa6.92□□□□□ -1.3
SNHG1-224ENST00000545688 JAZF1Q86VZ6 243 aa6.92□□□□□ -1.3
SNHG1-224ENST00000545688 NIM1KQ8IY84 436 aa6.92□□□□□ -1.3
SNHG1-224ENST00000545688 ZZZ3Q8IYH5 903 aa6.92□□□□□ -1.3
SNHG1-224ENST00000545688 EFHBQ8N7U6 833 aa6.92□□□□□ -1.3
SNHG1-224ENST00000545688 PLA2G15Q8NCC3 412 aa6.92□□□□□ -1.3
SNHG1-224ENST00000545688 A0A0A6YYJ9 748 aa6.91□□□□□ -1.3
SNHG1-224ENST00000545688 GOLGA8BA8MQT2 603 aa6.91□□□□□ -1.3
SNHG1-224ENST00000545688 CDC45O75419 566 aa6.91□□□□□ -1.3
SNHG1-224ENST00000545688 KLF10Q13118 480 aa6.91□□□□□ -1.3
SNHG1-224ENST00000545688 PCBP1Q15365 356 aaKnown RBP eCLIP6.91□□□□□ -1.3
SNHG1-224ENST00000545688 PLEKHG4BQ96PX9 1271 aa6.91□□□□□ -1.3
SNHG1-224ENST00000545688 MPHOSPH9Q99550 1183 aa6.91□□□□□ -1.3
SNHG1-224ENST00000545688 PCED1AQ9H1Q7 454 aa6.91□□□□□ -1.3
SNHG1-224ENST00000545688 ING1Q9UK53 422 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-224ENST00000545688 GIT1Q9Y2X7 761 aa6.91□□□□□ -1.3
SNHG1-224ENST00000545688 TGM5O43548 720 aa6.9□□□□□ -1.3
SNHG1-224ENST00000545688 OPHN1O60890 802 aa6.9□□□□□ -1.3
SNHG1-224ENST00000545688 TOX4O94842 621 aa6.9□□□□□ -1.3
SNHG1-224ENST00000545688 SEPT7Q16181 437 aaKnown RBP6.9□□□□□ -1.3
SNHG1-224ENST00000545688 LSM12Q3MHD2 195 aaKnown RBP6.9□□□□□ -1.3
SNHG1-224ENST00000545688 GAGE13Q4V321 117 aa6.9□□□□□ -1.3
SNHG1-224ENST00000545688 CACTINQ8WUQ7 758 aaKnown RBP6.9□□□□□ -1.3
SNHG1-224ENST00000545688 TARS2Q9BW92 718 aaKnown RBP6.9□□□□□ -1.3
SNHG1-224ENST00000545688 IL23AQ9NPF7 189 aa6.9□□□□□ -1.3
SNHG1-224ENST00000545688 A0A0A6YYK5 440 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-224ENST00000545688 UBE2QL1A1L167 161 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 ELL2O00472 640 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-224ENST00000545688 CYP27B1O15528 508 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 ZNF202O95125 648 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 VSIG10L2P0DP72 767 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 CD40P25942 277 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 HMGA2P52926 109 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 SMAD3P84022 425 aaKnown RBP6.89□□□□□ -1.31
SNHG1-224ENST00000545688 LRRC32Q14392 662 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 KRT40Q6A162 431 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 PASD1Q8IV76 773 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 THEMISQ8N1K5 641 aaPredicted RBP6.89□□□□□ -1.31
SNHG1-224ENST00000545688 FEZ1Q99689 392 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 NOL10Q9BSC4 688 aaKnown RBP6.89□□□□□ -1.31
SNHG1-224ENST00000545688 SOX7Q9BT81 388 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 MRIQ9BWK5 157 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 SYNPO2Q9UMS6 1093 aa6.89□□□□□ -1.31
SNHG1-224ENST00000545688 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
SNHG1-224ENST00000545688 DAPK3O43293 454 aa6.88□□□□□ -1.31
SNHG1-224ENST00000545688 KPNA1P52294 538 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-224ENST00000545688 CRHR2Q13324 411 aa6.88□□□□□ -1.31
SNHG1-224ENST00000545688 RRP1BQ14684 758 aaKnown RBP6.88□□□□□ -1.31
SNHG1-224ENST00000545688 DALRD3Q5D0E6 543 aaKnown RBP6.88□□□□□ -1.31
SNHG1-224ENST00000545688 FAM111BQ6SJ93 734 aa6.88□□□□□ -1.31
SNHG1-224ENST00000545688 NPM2Q86SE8 214 aaKnown RBP6.88□□□□□ -1.31
SNHG1-224ENST00000545688 SMC1BQ8NDV3 1235 aa6.88□□□□□ -1.31
SNHG1-224ENST00000545688 GPR101Q96P66 508 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-224ENST00000545688 TCF25Q9BQ70 676 aa6.88□□□□□ -1.31
SNHG1-224ENST00000545688 AURKAIP1Q9NWT8 199 aaPredicted RBP6.88□□□□□ -1.31
SNHG1-224ENST00000545688 RCAN3Q9UKA8 241 aa6.88□□□□□ -1.31
SNHG1-224ENST00000545688 MAFGO15525 162 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 NARSO43776 548 aaKnown RBP6.87□□□□□ -1.31
SNHG1-224ENST00000545688 PCDH8O95206 1070 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 JUNP05412 331 aaKnown RBP6.87□□□□□ -1.31
SNHG1-224ENST00000545688 SCNN1GP51170 649 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 ELAVL1Q15717 326 aaKnown RBP6.87□□□□□ -1.31
SNHG1-224ENST00000545688 ZBTB41Q5SVQ8 909 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 Q6ZRM9 215 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 TMPRSS6Q8IU80 811 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 ANKRD35Q8N283 1001 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 PPM1KQ8N3J5 372 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 MIEF2Q96C03 454 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 MFSD3Q96ES6 412 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 ZNF496Q96IT1 587 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-224ENST00000545688 MS4A5Q9H3V2 200 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 C14orf93Q9H972 538 aaKnown RBP6.87□□□□□ -1.31
SNHG1-224ENST00000545688 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.87□□□□□ -1.31
SNHG1-224ENST00000545688 CEP72Q9P209 647 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 NCDNQ9UBB6 729 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 MSRAQ9UJ68 235 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 PLAAQ9Y263 795 aa6.87□□□□□ -1.31
SNHG1-224ENST00000545688 MYPNQ86TC9 1320 aa6.86□□□□□ -1.31
SNHG1-224ENST00000545688 LCHNA4D1U4 455 aa6.86□□□□□ -1.31
SNHG1-224ENST00000545688 KIR2DL3P43628 341 aa6.86□□□□□ -1.31
SNHG1-224ENST00000545688 ABHD18Q0P651 414 aa6.86□□□□□ -1.31
SNHG1-224ENST00000545688 ESPNLQ6ZVH7 1005 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms