RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 CXXC1Q9P0U4 656 aaPredicted RBP15.34■□□□□ 0.05
TSEN54-203ENST00000545228 SUCLA2Q9P2R7 463 aaPredicted RBP15.34■□□□□ 0.05
TSEN54-203ENST00000545228 COL4A3BPQ9Y5P4 624 aa15.34■□□□□ 0.05
TSEN54-203ENST00000545228 A0A1B0GVL5 298 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 TMEM150BA6NC51 233 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 KINO60870 393 aaKnown RBP15.33■□□□□ 0.04
TSEN54-203ENST00000545228 SLFN14P0C7P3 912 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 PHKA2P46019 1235 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 CLCN3P51790 818 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 CRYBB1P53674 252 aaPredicted RBP15.33■□□□□ 0.04
TSEN54-203ENST00000545228 SMTNP53814 917 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 ZNF200P98182 395 aaPredicted RBP15.33■□□□□ 0.04
TSEN54-203ENST00000545228 FAM160A1Q05DH4 1040 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 POU5F1BQ06416 359 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 NCBP1Q09161 790 aaKnown RBP15.33■□□□□ 0.04
TSEN54-203ENST00000545228 FAM26DQ5JW98 314 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 RINT1Q6NUQ1 792 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 USP49Q70CQ1 688 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 ZBTB8OSQ8IWT0 167 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 LRRC71Q8N4P6 559 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 CNNM3Q8NE01 707 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 NLRP7Q8WX94 980 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 APBB2Q92870 758 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 CEP89Q96ST8 783 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 GCOM2Q9BZD3 368 aaPredicted RBP15.33■□□□□ 0.04
TSEN54-203ENST00000545228 SLC28A3Q9HAS3 691 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 PRDM6Q9NQX0 595 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 BLOC1S4Q9NUP1 217 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
TSEN54-203ENST00000545228 SEL1LQ9UBV2 794 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 HPSEQ9Y251 543 aa15.33■□□□□ 0.04
TSEN54-203ENST00000545228 SIP14410 1827 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 EFCAB14O75071 495 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 FAM13AO94988 1023 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 ACTN1P12814 892 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 GAP43P17677 238 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 SFPQP23246 707 aaKnown RBP eCLIP15.32■□□□□ 0.04
TSEN54-203ENST00000545228 NAMPTP43490 491 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 DHX8Q14562 1220 aaKnown RBP15.32■□□□□ 0.04
TSEN54-203ENST00000545228 MCM6Q14566 821 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 RUFY4Q6ZNE9 571 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 C1orf186Q6ZWK4 172 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 RHPN2Q8IUC4 686 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 CCDC65Q8IXS2 484 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 KIAA0319LQ8IZA0 1049 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 LINC01465Q8N7H1 131 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 PPP1R13LQ8WUF5 828 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 SH2D3AQ9BRG2 576 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 CELF4Q9BZC1 486 aaKnown RBP15.32■□□□□ 0.04
TSEN54-203ENST00000545228 POLR3FQ9H1D9 316 aaPredicted RBP15.32■□□□□ 0.04
TSEN54-203ENST00000545228 WNT8AQ9H1J5 351 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 NKX2-4Q9H2Z4 354 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 CDY2AQ9Y6F7 541 aa15.32■□□□□ 0.04
TSEN54-203ENST00000545228 EYSQ5T1H1 3165 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 ZBTB39O15060 712 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 CTSHP09668 335 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 IQCF3P0C7M6 154 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 IGFBP4P22692 258 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 GPC3P51654 580 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 NDUFA8P51970 172 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 EFNA5P52803 228 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 NLRP11P59045 1033 aaKnown RBP15.31■□□□□ 0.04
TSEN54-203ENST00000545228 HIC1Q14526 733 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 E2F4Q16254 413 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 TRIM71Q2Q1W2 868 aaKnown RBP15.31■□□□□ 0.04
TSEN54-203ENST00000545228 ZNF618Q5T7W0 954 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 STXBP4Q6ZWJ1 553 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 KCNK18Q7Z418 384 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 SRGAP1Q7Z6B7 1085 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 DEPTORQ8TB45 409 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 ATXN2LQ8WWM7 1075 aaKnown RBP15.31■□□□□ 0.04
TSEN54-203ENST00000545228 DHX38Q92620 1227 aaKnown RBP15.31■□□□□ 0.04
TSEN54-203ENST00000545228 NLRP4Q96MN2 994 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 TIGD1Q96MW7 591 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 CTAGE1Q96RT6 745 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 NFKBIZQ9BYH8 718 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 PANK2Q9BZ23 570 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 GTPBP4Q9BZE4 634 aaKnown RBP15.31■□□□□ 0.04
TSEN54-203ENST00000545228 PARVGQ9HBI0 331 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 KBTBD4Q9NVX7 518 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 THEGQ9P2T0 379 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 YBX2Q9Y2T7 364 aaKnown RBP15.31■□□□□ 0.04
TSEN54-203ENST00000545228 SLC4A7Q9Y6M7 1214 aa15.31■□□□□ 0.04
TSEN54-203ENST00000545228 LRRIQ4A6NIV6 560 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 GPR182O15218 404 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 HIP1RO75146 1068 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 PRPF40AO75400 957 aaKnown RBP15.3■□□□□ 0.04
TSEN54-203ENST00000545228 ZNF202O95125 648 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 MBD3O95983 291 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 VTNP04004 478 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 ARL2P36404 184 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 LAMTOR4Q0VGL1 99 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 ADGRE1Q14246 886 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 SCN5AQ14524 2016 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 NAALADL2Q58DX5 795 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 TSHZ1Q6ZSZ6 1077 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 PRPF31Q8WWY3 499 aaKnown RBP15.3■□□□□ 0.04
TSEN54-203ENST00000545228 SEPT8Q92599 483 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 DDX12PQ92771 950 aa15.3■□□□□ 0.04
TSEN54-203ENST00000545228 TMEM143Q96AN5 459 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms