RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 CCDC82Q8N4S0 544 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 TMEM87AQ8NBN3 555 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 IGSF21Q96ID5 467 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 KLHL5Q96PQ7 755 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 NRDE2Q9H7Z3 1164 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 IGSF9Q9P2J2 1179 aa10.68□□□□□ -0.7
CHD4-212ENST00000545083 C2orf16Q68DN1 1984 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 MEIS3P2A8K0S8 358 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 LRRN2O75325 713 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 CSDE1O75534 798 aaKnown RBP10.67□□□□□ -0.7
CHD4-212ENST00000545083 GALTP07902 379 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 TBC1D8BQ0IIM8 1120 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 GIT2Q14161 759 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 BMS1Q14692 1282 aaKnown RBP10.67□□□□□ -0.7
CHD4-212ENST00000545083 LONRF3Q496Y0 759 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 C15orf39Q6ZRI6 1047 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 HEATR3Q7Z4Q2 680 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 C1orf210Q8IVY1 113 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 CKAP2LQ8IYA6 745 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 MAML2Q8IZL2 1156 aaPredicted RBP10.67□□□□□ -0.7
CHD4-212ENST00000545083 SLC44A3Q8N4M1 653 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 GPR152Q8TDT2 470 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 BBXQ8WY36 941 aaPredicted RBP10.67□□□□□ -0.7
CHD4-212ENST00000545083 LPPQ93052 612 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 MYADMQ96S97 322 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 MRPL9Q9BYD2 267 aaKnown RBP10.67□□□□□ -0.7
CHD4-212ENST00000545083 ANO3Q9BYT9 981 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 DNAJB4Q9UDY4 337 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 AKT3Q9Y243 479 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 MAFBQ9Y5Q3 323 aaPredicted RBP10.67□□□□□ -0.7
CHD4-212ENST00000545083 FANCMQ8IYD8 2048 aa10.67□□□□□ -0.7
CHD4-212ENST00000545083 SPDYE4A6NLX3 237 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 FAM86B1E9PN63 330 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
CHD4-212ENST00000545083 LILRB3O75022 631 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 SSBP05455 408 aaKnown RBP eCLIP10.66□□□□□ -0.7
CHD4-212ENST00000545083 CNPP09543 421 aaKnown RBP10.66□□□□□ -0.7
CHD4-212ENST00000545083 FAM86B2P0C5J1 330 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 DARSP14868 501 aaKnown RBP10.66□□□□□ -0.7
CHD4-212ENST00000545083 RFX1P22670 979 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 GBP2P32456 591 aaPredicted RBP10.66□□□□□ -0.7
CHD4-212ENST00000545083 SLC11A1P49279 550 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 GNAQP50148 359 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 GPC3P51654 580 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 ATXN1P54253 815 aaKnown RBP10.66□□□□□ -0.7
CHD4-212ENST00000545083 NUCB1Q02818 461 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 WWC2Q6AWC2 1192 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 EFCAB12Q6NXP0 572 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 MIS18BP1Q6P0N0 1132 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 ZC3H14Q6PJT7 736 aaKnown RBP10.66□□□□□ -0.7
CHD4-212ENST00000545083 PPFIBP1Q86W92 1011 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 ST13P5Q8NFI4 369 aaPredicted RBP10.66□□□□□ -0.7
CHD4-212ENST00000545083 MAP7D2Q96T17 732 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 TBC1D13Q9NVG8 400 aa10.66□□□□□ -0.7
CHD4-212ENST00000545083 IGLV3-22A0A075B6J6 115 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 MAGEB2O15479 319 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 MYBP10242 640 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 SRFP11831 508 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 KLRC2P26717 231 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 SREBF1P36956 1147 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 PHLDB3Q6NSJ2 640 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 TMTC3Q6ZXV5 915 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 PLA2G4DQ86XP0 818 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 ZNF280BQ86YH2 543 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 CMASQ8NFW8 434 aaPredicted RBP10.65□□□□□ -0.7
CHD4-212ENST00000545083 FOXQ1Q9C009 403 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 GBP3Q9H0R5 595 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 WDR6Q9NNW5 1121 aaKnown RBP10.65□□□□□ -0.7
CHD4-212ENST00000545083 RIC8AQ9NPQ8 531 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 ARHGEF3Q9NR81 526 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 EPS15L1Q9UBC2 864 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 GABBR1Q9UBS5 961 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 INPP5FQ9Y2H2 1132 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 SIT1Q9Y3P8 196 aa10.65□□□□□ -0.7
CHD4-212ENST00000545083 CLUHO75153 1309 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 DOCK8Q8NF50 2099 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 COL4A3Q01955 1670 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 IPO5O00410 1097 aaKnown RBP10.64□□□□□ -0.71
CHD4-212ENST00000545083 PRC1O43663 620 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 ZNF862O60290 1169 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 OFD1O75665 1012 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 RFPL2O75678 378 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 IGHDP01880 384 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 GSPT1P15170 499 aaKnown RBP10.64□□□□□ -0.71
CHD4-212ENST00000545083 ZNF76P36508 570 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 PHKA2P46019 1235 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 CLK2P49760 499 aaKnown RBP10.64□□□□□ -0.71
CHD4-212ENST00000545083 NAPAP54920 295 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 DRP2Q13474 957 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 NOMO2Q5JPE7 1267 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 NFXL1Q6ZNB6 911 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 NIPA1Q7RTP0 329 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 CRYGNQ8WXF5 182 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 MAN1C1Q9NR34 630 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 DACT1Q9NYF0 836 aa10.64□□□□□ -0.71
CHD4-212ENST00000545083 CNTNAP5Q8WYK1 1306 aa10.63□□□□□ -0.71
CHD4-212ENST00000545083 CCDC195A0A1B0GUA6 201 aa10.63□□□□□ -0.71
CHD4-212ENST00000545083 CCDC69A6NI79 296 aa10.63□□□□□ -0.71
CHD4-212ENST00000545083 C2CD2LO14523 706 aa10.63□□□□□ -0.71
CHD4-212ENST00000545083 ADAMTS3O15072 1205 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms