RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 ATMQ13315 3056 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 BCLAF3A2AJT9 711 aaKnown RBP8.05□□□□□ -1.12
CIT-215ENST00000544800 CCDC192P0DO97 292 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 C6P13671 934 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 PAK2Q13177 524 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 STXBP2Q15833 593 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 TAF1BQ53T94 588 aaPredicted RBP8.05□□□□□ -1.12
CIT-215ENST00000544800 ZNF574Q6ZN55 896 aaPredicted RBP8.05□□□□□ -1.12
CIT-215ENST00000544800 SLC24A5Q71RS6 500 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 GET4Q7L5D6 327 aaPredicted RBP8.05□□□□□ -1.12
CIT-215ENST00000544800 GPR155Q7Z3F1 870 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 AMOTL1Q8IY63 956 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 SDR42E1Q8WUS8 393 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 TMEM169Q96HH4 297 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 ZNF512BQ96KM6 892 aaPredicted RBP8.05□□□□□ -1.12
CIT-215ENST00000544800 ARID3AQ99856 593 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 EMILIN2Q9BXX0 1053 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 TMEM117Q9H0C3 514 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 ATP6V0A4Q9HBG4 840 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 C1orf112Q9NSG2 853 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 PLA2G2EQ9NZK7 142 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 SUPT16HQ9Y5B9 1047 aaKnown RBP8.05□□□□□ -1.12
CIT-215ENST00000544800 MRVI1Q9Y6F6 885 aa8.05□□□□□ -1.12
CIT-215ENST00000544800 C2orf16Q68DN1 1984 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 CCDC163A0A0D9SF12 145 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 INPPL1O15357 1258 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 RPLP2P05387 115 aaKnown RBP8.04□□□□□ -1.12
CIT-215ENST00000544800 FGFR1P11362 822 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 ITPKBP27987 946 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 CREB5Q02930 508 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 CYP4F3Q08477 520 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 HNRNPDQ14103 355 aaKnown RBP8.04□□□□□ -1.12
CIT-215ENST00000544800 GAS6Q14393 721 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 PLK5Q496M5 336 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 CELF3Q5SZQ8 465 aaKnown RBP8.04□□□□□ -1.12
CIT-215ENST00000544800 PDXDC1Q6P996 788 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 LMBR1Q8WVP7 490 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 KCTD12Q96CX2 325 aaKnown RBP8.04□□□□□ -1.12
CIT-215ENST00000544800 LIN37Q96GY3 246 aaPredicted RBP8.04□□□□□ -1.12
CIT-215ENST00000544800 PHF20Q9BVI0 1012 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 TMX1Q9H3N1 280 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 PIDD1Q9HB75 910 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 MAN1C1Q9NR34 630 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 ATP8A2Q9NTI2 1148 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 TMEM161AQ9NX61 479 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 CDH7Q9ULB5 785 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 MGAQ8IWI9 3026 aa8.04□□□□□ -1.12
CIT-215ENST00000544800 FNDC1Q4ZHG4 1894 aaPredicted RBP8.03□□□□□ -1.12
CIT-215ENST00000544800 C9IYK1 514 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 HOXA2O43364 376 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 EIF3JO75822 258 aaKnown RBP8.03□□□□□ -1.12
CIT-215ENST00000544800 RHOBTB1O94844 696 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 PAPLNO95428 1278 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 LGALS2P05162 132 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 CHRNB1P11230 501 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 SLC1A4P43007 532 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 MRPS6P82932 125 aaKnown RBP8.03□□□□□ -1.12
CIT-215ENST00000544800 SEMA3BQ13214 749 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 UBAP2LQ14157 1087 aaKnown RBP8.03□□□□□ -1.12
CIT-215ENST00000544800 ELF2Q15723 593 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 PPP1R15BQ5SWA1 713 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 IER5Q5VY09 327 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 DDX53Q86TM3 631 aaKnown RBP8.03□□□□□ -1.12
CIT-215ENST00000544800 LRRC43Q8N309 656 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 ZNF454Q8N9F8 522 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 OXER1Q8TDS5 423 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 CLEC4DQ8WXI8 215 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 FAM3CQ92520 227 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 ZNF707Q96C28 371 aaPredicted RBP8.03□□□□□ -1.12
CIT-215ENST00000544800 GMCL1Q96IK5 515 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 CASD1Q96PB1 797 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 IWS1Q96ST2 819 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 ELAC1Q9H777 363 aaKnown RBP8.03□□□□□ -1.12
CIT-215ENST00000544800 RGS18Q9NS28 235 aa8.03□□□□□ -1.12
CIT-215ENST00000544800 ZMYM2Q9UBW7 1377 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 NF1P21359 2839 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 CYP2D7A0A087X1C5 515 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 IGKV6D-41A0A0C4DH26 115 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 A0A1B0GTL3 188 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 DENND3A2RUS2 1198 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 FSHRP23945 695 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 IL12RB1P42701 662 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 FAM193AP78312 1265 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 FAM189BP81408 668 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 PTGDRQ13258 359 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 KCNV1Q6PIU1 500 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 LRRC69Q6ZNQ3 347 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 NSUN6Q8TEA1 469 aaKnown RBP8.02□□□□□ -1.13
CIT-215ENST00000544800 DNAJB3Q8WWF6 145 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 DNASE1L2Q92874 299 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 ADAM2Q99965 735 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 DUSP15Q9H1R2 295 aaPredicted RBP8.02□□□□□ -1.13
CIT-215ENST00000544800 DNMT3LQ9UJW3 386 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 PNMA2Q9UL42 364 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 HDAC5Q9UQL6 1122 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 PCNX1Q96RV3 2341 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 IGSF9BQ9UPX0 1349 aa8.02□□□□□ -1.13
CIT-215ENST00000544800 KIAA1217Q5T5P2 1943 aa8.01□□□□□ -1.13
CIT-215ENST00000544800 LOXHD1Q8IVV2 1947 aa8.01□□□□□ -1.13
CIT-215ENST00000544800 CARNS1A5YM72 827 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms