RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 DLGAP5Q15398 846 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 C11orf63Q6NUN7 778 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 MIER3Q7Z3K6 550 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 FAM83AQ86UY5 434 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 SLC35G2Q8TBE7 412 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 RPS6KC1Q96S38 1066 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 PAGR1Q9BTK6 254 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 PLVAPQ9BX97 442 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 EPN3Q9H201 632 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 SMARCAL1Q9NZC9 954 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 ZBTB21Q9ULJ3 1066 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 SYNGAP1Q96PV0 1343 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 ZMYM2Q9UBW7 1377 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 A0A1W2PRG0 241 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 PODXLO00592 558 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 NDUFAB1O14561 156 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 DKC1O60832 514 aaKnown RBP eCLIP14.13□□□□□ -0.15
CPSF7-223ENST00000544669 PPP1R37O75864 691 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 KIAA0754O94854 1291 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 ASNSP08243 561 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 GZMAP12544 262 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 DNA2P51530 1060 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 HSD17B4P51659 736 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 PPATQ06203 517 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 TTMPQ5BVD1 217 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 YTHDF3Q7Z739 585 aaKnown RBP14.13□□□□□ -0.15
CPSF7-223ENST00000544669 C10orf67Q8IYJ2 551 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 RTKN2Q8IZC4 609 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 CYP2W1Q8TAV3 490 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 PRMT6Q96LA8 375 aaPredicted RBP14.13□□□□□ -0.15
CPSF7-223ENST00000544669 LXNQ9BS40 222 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 TAOK3Q9H2K8 898 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 TMBIM4Q9HC24 238 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 PACSIN2Q9UNF0 486 aaPredicted RBP14.13□□□□□ -0.15
CPSF7-223ENST00000544669 PLAAQ9Y263 795 aa14.13□□□□□ -0.15
CPSF7-223ENST00000544669 SIPA1L1O43166 1804 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 ZNF233A6NK53 670 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 ICAM1P05362 532 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 SCP2P22307 547 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 CTNNA1P35221 906 aaKnown RBP14.12□□□□□ -0.15
CPSF7-223ENST00000544669 GUCY2FP51841 1108 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 PTENP60484 403 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 SNAP25P60880 206 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 CEP85LQ5SZL2 805 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 XRRA1Q6P2D8 792 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 PADI6Q6TGC4 694 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 RDM1Q8NG50 284 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 LPAR1Q92633 364 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 ARL8AQ96BM9 186 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 FIZ1Q96SL8 496 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 AGPAT1Q99943 283 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 SYT11Q9BT88 431 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 UNC45AQ9H3U1 944 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 CNOT10Q9H9A5 744 aaKnown RBP14.12□□□□□ -0.15
CPSF7-223ENST00000544669 EFCC1Q9HA90 598 aa14.12□□□□□ -0.15
CPSF7-223ENST00000544669 CHMP2AO43633 222 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 HIP1RO75146 1068 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 CPP00450 1065 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 ZBTB48P10074 688 aaPredicted RBP14.11□□□□□ -0.15
CPSF7-223ENST00000544669 PLS3P13797 630 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 SFNP31947 248 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 USP8P40818 1118 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 MDH1P40925 334 aaKnown RBP14.11□□□□□ -0.15
CPSF7-223ENST00000544669 CYP2J2P51589 502 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 VAMP7P51809 220 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 GPC5P78333 572 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 RASA3Q14644 834 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 PLS1Q14651 629 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 RSBN1LQ6PCB5 846 aaPredicted RBP14.11□□□□□ -0.15
CPSF7-223ENST00000544669 HOOK3Q86VS8 718 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 LDHDQ86WU2 507 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 GLYCTKQ8IVS8 523 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 XXYLT1Q8NBI6 393 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 MTMR14Q8NCE2 650 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 UIMC1Q96RL1 719 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 MAF1Q9H063 256 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 C17orf75Q9HAS0 396 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 ZNF536O15090 1300 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 SFI1A8K8P3 1242 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 K7ENM7 598 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 PPIP5K2O43314 1243 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 RTN2O75298 545 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 KRT14P02533 472 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 FAM153BP0C7A2 387 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 CHRNA3P32297 505 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 HSD17B3P37058 310 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 QARSP47897 775 aaKnown RBP14.11□□□□□ -0.15
CPSF7-223ENST00000544669 JAK3P52333 1124 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 SMTNP53814 917 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 ERVK-9P63128 1117 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 FAM153CQ494X1 144 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 ZC2HC1CQ53FD0 456 aaPredicted RBP14.11□□□□□ -0.15
CPSF7-223ENST00000544669 SPICE1Q8N0Z3 855 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 PRPF38AQ8NAV1 312 aaKnown RBP14.11□□□□□ -0.15
CPSF7-223ENST00000544669 LNX1Q8TBB1 728 aaPredicted RBP14.11□□□□□ -0.15
CPSF7-223ENST00000544669 C7orf43Q8WVR3 580 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 PIK3R5Q8WYR1 880 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 STMN4Q9H169 189 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms